RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ITFG2Q969R8 447 aa16.92■□□□□ 0.3
SRSF1-206ENST00000583741 C10orf35Q96D05 121 aa16.92■□□□□ 0.3
SRSF1-206ENST00000583741 RNF114Q9Y508 228 aa16.92■□□□□ 0.3
SRSF1-206ENST00000583741 GGT3PA6NGU5 568 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 PDCD5O14737 125 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 IRF2P14316 349 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 IGFBP3P17936 291 aaPredicted RBP16.91■□□□□ 0.3
SRSF1-206ENST00000583741 RAB3BP20337 219 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 SOX6P35712 828 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 PPP3R1P63098 170 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 LINC01006Q8NI28 216 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 SSMEM1Q8WWF3 244 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 SLC25A46Q96AG3 418 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 TECTBQ96PL2 329 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 UFSP2Q9NUQ7 469 aa16.91■□□□□ 0.3
SRSF1-206ENST00000583741 CCDC59Q9P031 241 aaKnown RBP16.91■□□□□ 0.3
SRSF1-206ENST00000583741 TOX4O94842 621 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 TSPAN15O95858 294 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 MAS1P04201 325 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 DDOSTP39656 456 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 CD200P41217 278 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 PDCD1Q15116 288 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 DGUOKQ16854 277 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 CEP78Q5JTW2 689 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 C1QL4Q86Z23 238 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 CELF2-AS1Q8N7Q2 184 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 OR56B2PQ8NGI1 322 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 OR13C9Q8NGT0 318 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 PP6455Q8WZ26 134 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 DYRK2Q92630 601 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 SMURF1Q9HCE7 757 aa16.9■□□□□ 0.3
SRSF1-206ENST00000583741 GPR137BO60478 399 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 IGHV4-59P01825 116 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 NPY4RP50391 375 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 RORCP51449 518 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 PROK1P58294 105 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 RPL15P61313 204 aaKnown RBP16.89■□□□□ 0.29
SRSF1-206ENST00000583741 ZBTB37Q5TC79 503 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 LRRTM1Q86UE6 522 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 CSNK2A3Q8NEV1 391 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 OR1M1Q8NGA1 313 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 OR11L1Q8NGX0 322 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 ERGIC1Q969X5 290 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 CHST5Q9GZS9 411 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 ZCCHC4Q9H5U6 513 aa16.89■□□□□ 0.29
SRSF1-206ENST00000583741 AK6Q9Y3D8 172 aaKnown RBP16.89■□□□□ 0.29
SRSF1-206ENST00000583741 ZNF816-ZNF321PA0A0X1KG74 233 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 ANXA2P2A6NMY6 339 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 CLPXO76031 633 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 RAB3AP20336 220 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 CAV3P56539 151 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 OR10A3P58181 314 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 TAF9Q16594 264 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 SFRP4Q6FHJ7 346 aaPredicted RBP16.88■□□□□ 0.29
SRSF1-206ENST00000583741 ZNF529Q6P280 563 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 UTS2BQ765I0 119 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 NR2C2APQ86WQ0 139 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 FTMTQ8N4E7 242 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 OR51A2Q8NGJ7 313 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 WDFY2Q96P53 400 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 SIRPDQ9H106 197 aa16.88■□□□□ 0.29
SRSF1-206ENST00000583741 IGHV1-69DA0A0B4J2H0 117 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 CD300LBA8K4G0 201 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 SULT1B1O43704 296 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 FCN3O75636 299 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 IGHV1-69P01742 117 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 CD276Q5ZPR3 534 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 CROCCP3Q8IVE0 287 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 TBC1D15Q8TC07 691 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 BARHL1Q9BZE3 327 aa16.87■□□□□ 0.29
SRSF1-206ENST00000583741 A0A0U1RQK1 487 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 MEGF11A6BM72 1044 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 NOTOA8MTQ0 251 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 C3orf80F5H4A9 247 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 BDKRB2P30411 391 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 CLVS2Q5SYC1 327 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 METTL11BQ5VVY1 283 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 SFXN4Q6P4A7 337 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 NKAIN3Q8N8D7 197 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 BOLLQ8N9W6 283 aaKnown RBP16.86■□□□□ 0.29
SRSF1-206ENST00000583741 DNAAF1Q8NEP3 725 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 LHX4Q969G2 390 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 GFI1Q99684 422 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 SLIRPQ9GZT3 109 aaKnown RBP16.86■□□□□ 0.29
SRSF1-206ENST00000583741 TMEM138Q9NPI0 162 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 RNF7Q9UBF6 113 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 V9GY05 133 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 LGALS8O00214 317 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 LIPFP07098 398 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 OCMP0CE72 109 aaPredicted RBP16.86■□□□□ 0.29
SRSF1-206ENST00000583741 IER3P46695 156 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 PSMD7P51665 324 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 UBE2V2Q15819 145 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 TMEM42Q69YG0 159 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 PIGCQ92535 297 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 PAPOLGQ9BWT3 736 aaKnown RBP16.86■□□□□ 0.29
SRSF1-206ENST00000583741 GPR173Q9NS66 373 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 RHBDD3Q9Y3P4 386 aa16.86■□□□□ 0.29
SRSF1-206ENST00000583741 ANKRD30BLA7E2S9 258 aa16.85■□□□□ 0.29
SRSF1-206ENST00000583741 ADAM20O43506 726 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms