RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 BIKQ13323 160 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF235Q14590 738 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 GUSBP1Q15486 140 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF404Q494X3 552 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 CLLU1OSQ5K130 101 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 LINC00596Q86U02 117 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 NT5DC3Q86UY8 548 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF555Q8NEP9 628 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 UBA3Q8TBC4 463 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 LRRC20Q8TCA0 184 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF396Q96N95 335 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 TRIM45Q9H8W5 580 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 FAM60AQ9NP50 221 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 TAC3Q9UHF0 121 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF229Q9UJW7 825 aa2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 ZNF706Q9Y5V0 76 aaPredicted RBP2.34□□□□□ -2.03
SMCHD1-205ENST00000581383 WIZO95785 1651 aa2.34□□□□□ -2.04
SMCHD1-205ENST00000581383 KIF21AQ7Z4S6 1674 aa2.34□□□□□ -2.04
SMCHD1-205ENST00000581383 SHROOM3Q8TF72 1996 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 MGAT4DA6NG13 374 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 PSMD11O00231 422 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 COX7A2P2O60397 106 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 ZMPSTE24O75844 475 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF35P13682 527 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 C2orf80Q0P641 193 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 GPR176Q14439 515 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 TNXAQ16473 311 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 CEACAM16Q2WEN9 425 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 ATP6AP1LQ52LC2 224 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 ADM2Q7Z4H4 148 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 FAM19A1Q7Z5A9 133 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 TMEM144Q7Z5S9 345 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 OR4C13Q8NGP0 309 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 OR2K2Q8NGT1 345 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 OR51Q1Q8NH59 317 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 PLA2G12AQ9BZM1 189 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 NLE1Q9NVX2 485 aaPredicted RBP2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 RMND1Q9NWS8 449 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 CLEC2DQ9UHP7 191 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 STK38LQ9Y2H1 464 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF780BQ9Y6R6 833 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 CACNA1DQ01668 2161 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 FANCD2Q9BXW9 1451 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 CEP164Q9UPV0 1460 aa2.33□□□□□ -2.04
SMCHD1-205ENST00000581383 PLXNB3Q9ULL4 1909 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 URB2Q14146 1524 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 PEG3Q9GZU2 1588 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 PRR14LQ5THK1 2151 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 A0A1W2PNN7 141 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 hCG_2039718K7EN88 272 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 IGHG2P01859 326 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 GIMD1P0DJR0 217 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 INAFM2P0DMQ5 153 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 DSTNP60981 165 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 ACTBL2Q562R1 376 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 UBE2NLQ5JXB2 153 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 LDLRAD2Q5SZI1 272 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 LIN9Q5TKA1 542 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 ZFAND6Q6FIF0 208 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF773Q6PK81 442 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 BRD3OSQ6XYD6 125 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 CYP4Z1Q86W10 505 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 RBM45Q8IUH3 476 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 TRIML2Q8N7C3 387 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 BLNKQ8WV28 456 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 YIPF5Q969M3 257 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 TVP23CQ96ET8 276 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 MSANTD3Q96H12 275 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 OR2V2Q96R30 315 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 NXF2Q9GZY0 626 aaKnown RBP2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 RAB1BQ9H0U4 201 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 HAUS4Q9H6D7 363 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 TAS2R1Q9NYW7 299 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 ZNF391Q9UJN7 358 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 SDK2Q58EX2 2172 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 LAMC3Q9Y6N6 1575 aa2.32□□□□□ -2.04
SMCHD1-205ENST00000581383 IGKV3D-11A0A0A0MRZ8 115 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 A0A1B0GW15 77 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 RBFOX3A6NFN3 312 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 IGLL5B9A064 214 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 UPK2O00526 184 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 SPOPO43791 374 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 TPM1P09493 284 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 M6PRP20645 277 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 DNASE1L1P49184 302 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 CCL23P55773 120 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 KLF3P57682 345 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 BNIP2Q12982 314 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 TMEM241Q24JQ0 296 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 C18orf21Q32NC0 220 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 Q499Y3 187 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 SPIN3Q5JUX0 258 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 CLEC12AQ5QGZ9 265 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 MRPL2Q5T653 305 aaKnown RBP2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 AADACL4Q5VUY2 407 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 CLEC18BQ6UXF7 455 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 DRAXINQ8NBI3 349 aaPredicted RBP2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 OR6K3Q8NGY3 331 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 FMC1Q96HJ9 113 aa2.31□□□□□ -2.04
SMCHD1-205ENST00000581383 ZBED3Q96IU2 234 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms