RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 IL6P05231 212 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 EIF4EP06730 217 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 CSF3P09919 207 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PATE4P0C8F1 98 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 GKN3PP0CG01 181 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 THRAP10827 490 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PGAM2P15259 253 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PSMB9P28065 219 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TIMP3P35625 211 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 CBX5P45973 191 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 GNG10P50151 68 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 RPS21P63220 83 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 AESQ08117 197 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF763Q0D2J5 394 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SRSF6Q13247 344 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TGIF1Q15583 401 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TOMM34Q15785 309 aaPredicted RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ZSCAN26Q16670 478 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 CLEC12BQ2HXU8 276 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TMEM176BQ3YBM2 270 aaPredicted RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SPIN4Q56A73 249 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 NHLRC3Q5JS37 347 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SPIN3Q5JUX0 258 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 AVPI1Q5T686 147 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SYPL2Q5VXT5 272 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 REG3GQ6UW15 175 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 METTL7BQ6UX53 244 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 C2orf66Q6UXQ4 117 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 BAIAP2L2Q6UXY1 529 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TEX43Q6ZNM6 134 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 CCDC121Q6ZUS5 278 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF589Q86UQ0 364 aaPredicted RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 NT5DC3Q86UY8 548 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 BLIDQ8IZY5 108 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 Q8NBF4 154 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 OR10J6PQ8NGY7 276 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 NT5CQ8TCD5 201 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 BLOC1S5Q8TDH9 187 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 FAM3DQ96BQ1 224 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TESCQ96BS2 214 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 DDIT4LQ96D03 193 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PPP1R36Q96LQ0 422 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF597Q96LX8 424 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PACRGQ96M98 296 aaPredicted RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 OR2M4Q96R27 311 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 C20orf144Q9BQM9 153 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 UGT2B28Q9BY64 529 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 BCL2L14Q9BZR8 327 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TRIM15Q9C019 465 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 POLR2J2Q9GZM3 115 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 POLR2J3Q9H1A7 115 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 LHX5Q9H2C1 402 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PANK3Q9H999 370 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 FGF22Q9HCT0 170 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 MED4Q9NPJ6 270 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 C12orf4Q9NQ89 552 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 MIEF1Q9NQG6 463 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ZNF629Q9UEG4 869 aaPredicted RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TRMT112Q9UI30 125 aaKnown RBP2.4□□□□□ -2.03
KPNB1-208ENST00000580019 ANXA10Q9UJ72 324 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 TP53TG5Q9Y2B4 290 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SNX10Q9Y5X0 201 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 CEP250Q9BV73 2442 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 PTPN13Q12923 2485 aa2.4□□□□□ -2.03
KPNB1-208ENST00000580019 SPEGQ15772 3267 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 BPTFQ12830 3046 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 TRIOO75962 3097 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 TECTAO75443 2155 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 IGHV3OR16-9A0A0B4J2B5 98 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 DAPL1A0PJW8 107 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 F5H5K5 113 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 CXCR6O00574 342 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 XKRYO14609 159 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 MYL12BO14950 172 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 STX10O60499 249 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 LMX1BO60663 402 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 SLC22A5O76082 557 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 DUS4LO95620 317 aaKnown RBP2.39□□□□□ -2.03
KPNB1-208ENST00000580019 KRT75O95678 551 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 SLC25A27O95847 323 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 TNNC2P02585 160 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 THY1P04216 161 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 SEMG1P04279 462 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 TCRBP04435 133 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 FABP1P07148 127 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 MRPL3P09001 348 aaKnown RBP2.39□□□□□ -2.03
KPNB1-208ENST00000580019 MMP7P09237 267 aaPredicted RBP2.39□□□□□ -2.03
KPNB1-208ENST00000580019 CCDC166P0CW27 439 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 ERGP11308 486 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 CD1EP15812 388 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 FUT3P21217 361 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 MYCNOSP40205 109 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 CLDN12P56749 244 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 OR4D2P58180 307 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 TAS2R19P59542 299 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 KRTAP12-2P59991 146 aa2.39□□□□□ -2.03
KPNB1-208ENST00000580019 RPS23P62266 143 aaKnown RBP2.39□□□□□ -2.03
KPNB1-208ENST00000580019 LSM6P62312 80 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms