RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 HLA-DQB1P01920 261 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FAM90A15PP0C7V4 464 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FAM90A13PP0C7W8 464 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FAM90A14PP0C7W9 464 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FAM90A24PP0C7X0 464 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 PTBP1P26599 531 aaKnown RBP eCLIP11.66□□□□□ -0.54
TSEN54-206ENST00000579449 CD80P33681 288 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 MNDAP41218 407 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 PTH2RP49190 550 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 TMEM50BP56557 158 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 ZNF79Q15937 498 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FAM201AQ5SY85 155 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 SIGIRRQ6IA17 410 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 FIP1L1Q6UN15 594 aaKnown RBP11.66□□□□□ -0.54
TSEN54-206ENST00000579449 RTN4RL2Q86UN3 420 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 IGFBPL1Q8WX77 278 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 CCL17Q92583 94 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 YIPF5Q969M3 257 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 RABL2AQ9UBK7 228 aaPredicted RBP11.66□□□□□ -0.54
TSEN54-206ENST00000579449 RABL2BQ9UNT1 228 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 NPTNQ9Y639 398 aa11.66□□□□□ -0.54
TSEN54-206ENST00000579449 IGHV3OR15-7A0A075B7D8 119 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 LRRC30A6NM36 301 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 LYNX1G3V0Z9 82 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 TMEM178BH3BS89 294 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.65□□□□□ -0.54
TSEN54-206ENST00000579449 J3QRK9 145 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 OR7C1O76099 320 aaPredicted RBP11.65□□□□□ -0.54
TSEN54-206ENST00000579449 KNG1P01042 644 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 LYNX1P0DP58 116 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 PTHLHP12272 177 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 GNB3P16520 340 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 COL8A2P25067 703 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 SSTR2P30874 369 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 SCN1BQ07699 218 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 IKZF1Q13422 519 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ZNF146Q15072 292 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 MPV17LQ2QL34 196 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 SMIM21Q3B7S5 101 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ZNF260Q3ZCT1 412 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 CDNFQ49AH0 187 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 PYDC2Q56P42 97 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 PLAC9Q5JTB6 97 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 HIST2H2BCQ6DN03 193 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 PYHIN1Q6K0P9 492 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 Q6P435 159 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 Q6ZTK2 550 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 LINC00596Q86U02 117 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 SNX29P2Q8IUI4 249 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 C1orf87Q8N0U7 546 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 C19orf18Q8NEA5 215 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 MARVELD3Q96A59 401 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 RAB3CQ96E17 227 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ARHGAP5-AS1Q96IT6 56 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 CYYR1Q96J86 154 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ABHD1Q96SE0 405 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 CCL19Q99731 98 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 NUDT16L1Q9BRJ7 211 aaKnown RBP11.65□□□□□ -0.54
TSEN54-206ENST00000579449 PECRQ9BY49 303 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 SRRQ9GZT4 340 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 ZMAT3Q9HA38 289 aaKnown RBP11.65□□□□□ -0.54
TSEN54-206ENST00000579449 DNAJB11Q9UBS4 358 aa11.65□□□□□ -0.54
TSEN54-206ENST00000579449 RFPL4AA6NLU0 287 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 RFPL4AL1F8VTS6 287 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 SH2D1BO14796 132 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 PDCD6O75340 191 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 LY6HO94772 140 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 TPPPO94811 219 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 ZNF205O95201 554 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 HIST1H1DP16402 221 aaKnown RBP11.64□□□□□ -0.55
TSEN54-206ENST00000579449 FUT3P21217 361 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 CHATP28329 748 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 CEBPDP49716 269 aaPredicted RBP11.64□□□□□ -0.55
TSEN54-206ENST00000579449 PPP5CP53041 499 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 PITPNAQ00169 270 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 HFEQ30201 348 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 SPIN3Q5JUX0 258 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 NKAPLQ5M9Q1 402 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 ATAD3CQ5T2N8 411 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 SFRP4Q6FHJ7 346 aaPredicted RBP11.64□□□□□ -0.55
TSEN54-206ENST00000579449 FAM90A1Q86YD7 464 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 OR5T2Q8NGG2 359 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 RDH5Q92781 318 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 GCDHQ92947 438 aaPredicted RBP11.64□□□□□ -0.55
TSEN54-206ENST00000579449 NEDD4LQ96PU5 975 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 SDHCQ99643 169 aaPredicted RBP11.64□□□□□ -0.55
TSEN54-206ENST00000579449 LIME1Q9H400 295 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 AUNIPQ9H7T9 357 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 PLEKHJ1Q9NW61 149 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 NLKQ9UBE8 527 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 GLS2Q9UI32 602 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 WIPI2Q9Y4P8 454 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 CRYBG3Q68DQ2 2970 aa11.64□□□□□ -0.55
TSEN54-206ENST00000579449 TMEM235A6NFC5 223 aa11.63□□□□□ -0.55
TSEN54-206ENST00000579449 DEGS1O15121 323 aa11.63□□□□□ -0.55
TSEN54-206ENST00000579449 NDUFS7O75251 213 aa11.63□□□□□ -0.55
TSEN54-206ENST00000579449 OR2H2O95918 312 aa11.63□□□□□ -0.55
TSEN54-206ENST00000579449 HAND1O96004 215 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms