RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 DHDHQ9UQ10 334 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 MYRFQ9Y2G1 1151 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 IGKV1-9A0A0C4DH69 117 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 hADV38S2A0JD32 116 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 OR4C45A6NMZ5 311 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 H3BUX3 64 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 IGHA1P01876 353 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF728P0DKX0 622 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 PDZK1IP1Q13113 114 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 GRK1Q15835 563 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 SPIN3Q5JUX0 258 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 SERPINA12Q8IW75 414 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 OR52I1Q8NGK6 324 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 OR13D1Q8NGV5 346 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 CPNE2Q96FN4 548 aaPredicted RBP12.65□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF714Q96N38 554 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 SSX3Q99909 188 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 CHST6Q9GZX3 395 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 PPA2Q9H2U2 334 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 ZCCHC4Q9H5U6 513 aa12.65□□□□□ -0.38
SF3B3-215ENST00000577085 MEX3AA1L020 520 aaKnown RBP12.64□□□□□ -0.39
SF3B3-215ENST00000577085 SH2D1BO14796 132 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 MAGEB3O15480 346 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 ZNF737O75373 536 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 ARG1P05089 322 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 CALCBP10092 127 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 DUSP1P28562 367 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 NPBWR2P48146 333 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 MEF2CQ06413 473 aaPredicted RBP12.64□□□□□ -0.39
SF3B3-215ENST00000577085 DYNC1I2Q13409 638 aaKnown RBP12.64□□□□□ -0.39
SF3B3-215ENST00000577085 LRRC36Q1X8D7 754 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 LRRC75BQ2VPJ9 315 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 HCP5Q6MZN7 132 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 TRAPPC6BQ86SZ2 158 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 OR5D18Q8NGL1 313 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 OR10AC1Q8NH08 325 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 CYGBQ8WWM9 190 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 SPACA5Q96QH8 159 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 RAB18Q9NP72 206 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 EXOSC4Q9NPD3 245 aaKnown RBP12.64□□□□□ -0.39
SF3B3-215ENST00000577085 GSTK1Q9Y2Q3 226 aa12.64□□□□□ -0.39
SF3B3-215ENST00000577085 IRGMA1A4Y4 181 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 ZFPL1O95159 310 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 RBP4P02753 201 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 TMEM225BP0DP42 221 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 MYL12AP19105 171 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 BMXP51813 675 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 SCN1BQ07699 218 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 LY6EQ16553 131 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 LPCAT4Q643R3 524 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 TMPRSS11AQ6ZMR5 421 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 LINC01006Q8NI28 216 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 C17orf50Q8WW18 174 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 PDCD1LG2Q9BQ51 273 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 HMG20AQ9NP66 347 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 C8orf4Q9NR00 106 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 IL36RNQ9UBH0 155 aa12.63□□□□□ -0.39
SF3B3-215ENST00000577085 TMEM82A0PJX8 343 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 FUOMA2VDF0 154 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 SIRPB1O00241 398 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 MGST3O14880 152 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 TIMM23O14925 209 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 SULT1B1O43704 296 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 MT-ND2P03891 347 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 MED21Q13503 144 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 ZNF146Q15072 292 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 TTC23Q5W5X9 447 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 TREML4Q6UXN2 200 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 Q6ZSV7 163 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 TPRX1Q8N7U7 411 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 SETD9Q8NE22 299 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 FOXRED1Q96CU9 486 aaPredicted RBP12.62□□□□□ -0.39
SF3B3-215ENST00000577085 GPER1Q99527 375 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 SEBOXQ9HB31 216 aaPredicted RBP12.62□□□□□ -0.39
SF3B3-215ENST00000577085 RHOFQ9HBH0 211 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 ABCB10Q9NRK6 738 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 MRPS18AQ9NVS2 196 aaKnown RBP12.62□□□□□ -0.39
SF3B3-215ENST00000577085 CHCHD3Q9NX63 227 aaKnown RBP12.62□□□□□ -0.39
SF3B3-215ENST00000577085 LINC00312Q9Y6C7 94 aa12.62□□□□□ -0.39
SF3B3-215ENST00000577085 E9PI62 339 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 M0QZ24 198 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 KDM4BO94953 1096 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 CD2P06729 351 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 IGHV1-8P0DP01 117 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 ZNF44P15621 663 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 RAB3AP20336 220 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 DCKP27707 260 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 SRSF4Q08170 494 aaKnown RBP12.61□□□□□ -0.39
SF3B3-215ENST00000577085 KISS1Q15726 138 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 AANATQ16613 207 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 SMN1Q16637 294 aaKnown RBP12.61□□□□□ -0.39
SF3B3-215ENST00000577085 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 SATL1Q86VE3 508 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 SAXO1Q8IYX7 474 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 C11orf42Q8N5U0 333 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 PARP16Q8N5Y8 322 aa12.61□□□□□ -0.39
SF3B3-215ENST00000577085 OR52N4Q8NGI2 321 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms