RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 EMG1Q92979 244 aaKnown RBP9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLAMF9Q96A28 289 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 CADM1Q9BY67 442 aaKnown RBP9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 TTTY10Q9BZA0 68 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 CHST6Q9GZX3 395 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 FAM107BQ9H098 131 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 MTCH1Q9NZJ7 389 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR52A1Q9UKL2 312 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 R4GMQ9 66 aa9.26□□□□□ -0.93
CTDNEP1-212ENST00000576613 NUDT19A8MXV4 375 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 PRR32B1ATL7 298 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 F8VVB4 439 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 F8VWA3 439 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 TOR1AO14656 332 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 MGST3O14880 152 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 RAMP3O60896 148 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 SRSF10O75494 262 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 GATBO75879 557 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 CST1P01037 141 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 IGHA1P01876 353 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 AMY1AP04745 511 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 AMY2AP04746 511 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 RAP2AP10114 183 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 GP2P55259 537 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 P2RX3P56373 397 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF322Q6U7Q0 402 aaPredicted RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 ARHGAP24Q8N264 748 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 CNN2Q99439 309 aaKnown RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 SEBOXQ9HB31 216 aaPredicted RBP9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZFP57Q9NU63 452 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 COPS3Q9UNS2 423 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 MOB4Q9Y3A3 225 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 SNX5Q9Y5X3 404 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 HSPE1-MOB4S4R3N1 261 aa9.25□□□□□ -0.93
CTDNEP1-212ENST00000576613 TRGV10A0A0A0MS01 117 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 A0A1B0GTI1 187 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 FUOMA2VDF0 154 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 SH2D7A6NKC9 451 aaPredicted RBP9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 H0YHG0 523 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 GNGT2O14610 69 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 SNX3O60493 162 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 PSPNO60542 156 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 MMP23AO75900 390 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 INMTO95050 263 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZFPL1O95159 310 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 CYB5AP00167 134 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 IGLV1-47P01700 117 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 FAM106CPP0CH98 169 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 CDK2P24941 298 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 ERP29P30040 261 aaKnown RBP9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 MYCNOSP40205 109 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 FUT6P51993 359 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 CXCR4P61073 352 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 PRAMEF5Q5TYX0 476 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 HEPN1Q6WQI6 88 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 Q6ZSR3 168 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 C8orf86Q6ZUL3 223 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLC25A26Q70HW3 274 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR2W3Q7Z3T1 314 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF329Q86UD4 541 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 KLHL30-AS1Q8NEE0 82 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR52N4Q8NGI2 321 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 CHPT1Q8WUD6 406 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 TFAP2CQ92754 450 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 MNTQ99583 582 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLC25A19Q9HC21 320 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 ARL8BQ9NVJ2 186 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 HHLA2Q9UM44 414 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 STAB2Q8WWQ8 2551 aa9.24□□□□□ -0.93
CTDNEP1-212ENST00000576613 CCDC182A6NF36 153 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 BUB1B-PAK6H3BSN5 160 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 SERPINA3P01011 423 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 CCL1P22362 96 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 CD34P28906 385 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 OR3A4PP47883 348 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 PRRX1P54821 245 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 CDC42P60953 191 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 SLC35B1P78383 322 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 TRIM25Q14258 630 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 HLA-DRB5Q30154 266 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 SPIN3Q5JUX0 258 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 TPTE2P1Q5T6R2 138 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 TMEM236Q5W0B7 351 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 COMMD1Q8N668 190 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 BORCS8Q96FH0 119 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 LRGUKQ96M69 825 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 P2RX4Q99571 388 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 APOL4Q9BPW4 351 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 PRRG3Q9BZD7 231 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 MED4Q9NPJ6 270 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 PCDHB16Q9NRJ7 776 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 TAS2R3Q9NYW6 316 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 TVP23BQ9NYZ1 205 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 IL36RNQ9UBH0 155 aa9.23□□□□□ -0.93
CTDNEP1-212ENST00000576613 IGKV1-27A0A075B6S5 117 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 TRBV2A0A0J9YWF9 115 aa9.22□□□□□ -0.93
CTDNEP1-212ENST00000576613 FAM172BPA6NC97 362 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms