RNA–Protein interactions for RNA: ENST00000574022.1

CHD3-217, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 103 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-217ENST00000574022 AP3S2P59780 193 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 KRTAP10-11P60412 298 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ACTBP60709 375 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 DYNLL1P63167 89 aaKnown RBP1.45□□□□□ -2.18
CHD3-217ENST00000574022 ACTG1P63261 375 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM3AP98173 230 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 MGAT3Q09327 533 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 SMAGPQ0VAQ4 97 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM53BQ14153 422 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ZNF235Q14590 738 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LPAL2Q16609 132 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 CCL15Q16663 113 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 C4orf26Q17RF5 130 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 Q499Y3 187 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ACSM3Q53FZ2 586 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 SMUG1Q53HV7 270 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 SPIN4Q56A73 249 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM78AQ5JUQ0 283 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 UBE2NLQ5JXB2 153 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM162BQ5T6X4 162 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LCE1AQ5T7P2 110 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 TSPO2Q5TGU0 170 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 RSBN1Q5VWQ0 802 aaPredicted RBP1.45□□□□□ -2.18
CHD3-217ENST00000574022 CST9Q5W186 159 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LPCAT4Q643R3 524 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 GUSBP11Q6P575 273 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 CD200R1LQ6Q8B3 271 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LRRN1Q6UXK5 716 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 CASP12Q6UXS9 341 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 DGAT2L6Q6ZPD8 337 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM231DQ6ZW35 169 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 CALHM1Q8IU99 346 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 WDFY1Q8IWB7 410 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 RIMKLAQ8IXN7 391 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 HS3ST5Q8IZT8 346 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ZNF645Q8N7E2 425 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ZNF485Q8NCK3 441 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 OR4P4Q8NGL7 312 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 OR6K3Q8NGY3 331 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LINC01006Q8NI28 216 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 BLOC1S5Q8TDH9 187 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 CASTOR1Q8WTX7 329 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ORAOV1Q8WV07 137 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 TESCQ96BS2 214 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 NEURL3Q96EH8 262 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FAM210BQ96KR6 192 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 SLC22A4Q9H015 551 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 OR51E2Q9H255 320 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 OR52D1Q9H346 318 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 FBXL15Q9H469 300 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 POMKQ9H5K3 350 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 HMG20AQ9NP66 347 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 DMAC2Q9NW81 257 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 OR12D3Q9UGF7 316 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 TP53TG1Q9Y2A0 90 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 KLF13Q9Y2Y9 288 aaPredicted RBP1.45□□□□□ -2.18
CHD3-217ENST00000574022 INSIG2Q9Y5U4 225 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ZNF780BQ9Y6R6 833 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 ADAMTS13Q76LX8 1427 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 LTBP1Q14766 1721 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 NOTCH4Q99466 2003 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 C2orf16Q68DN1 1984 aa1.45□□□□□ -2.18
CHD3-217ENST00000574022 DNMT1P26358 1616 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 SNAPC4Q5SXM2 1469 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TRAV8-3A0A0A6YYJ7 113 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 IGHV1OR15-9A0A0B4J2B8 117 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 IGHV3-64DA0A0J9YX35 117 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 A0A0U1RQV1 116 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 A0A1B0GVX0 72 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 OR5H1A6NKK0 313 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 C11orf94C9JXX5 98 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 UPK1AO00322 258 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 FFAR1O14842 300 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ACOX3O15254 700 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ANGPTL7O43827 346 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 COX7A2P2O60397 106 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 GCM2O75603 506 aaPredicted RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 CNMDO75829 334 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 SCO1O75880 301 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 VAMP5O95183 116 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 IGLV2-8P01709 118 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 IGHV3-11P01762 117 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 APCSP02743 223 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ISG15P05161 165 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ZNF688P0C7X2 276 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 TLX1NBP0CAT3 122 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 IGHV1-8P0DP01 117 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 ADRB3P13945 408 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CD99P14209 185 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 CFL1P23528 166 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 PRTN3P24158 256 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 RPS12P25398 132 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 ADORA1P30542 326 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 PYCR1P32322 319 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 PPP1R2P41236 205 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 KIR3DL2P43630 455 aa1.44□□□□□ -2.18
CHD3-217ENST00000574022 RPS10P46783 165 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 IDH2P48735 452 aaKnown RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 MEF2CQ06413 473 aaPredicted RBP1.44□□□□□ -2.18
CHD3-217ENST00000574022 CDC20Q12834 499 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms