RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 ASCC1Q8N9N2 400 aaKnown RBP22.76■■□□□ 1.23
SCARF1-207ENST00000573867 NKX3-1Q99801 234 aaPredicted RBP22.76■■□□□ 1.23
SCARF1-207ENST00000573867 PRDM13Q9H4Q3 707 aa22.76■■□□□ 1.23
SCARF1-207ENST00000573867 TRBV5-5A0A0J9YX44 114 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 M0R1W7 72 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 KDM4BO94953 1096 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 HAND1O96004 215 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 CYB5AP00167 134 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 CHRM2P08172 466 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 PRKACAP17612 351 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 SNU13P55769 128 aaKnown RBP22.75■■□□□ 1.23
SCARF1-207ENST00000573867 TMEM200BQ69YZ2 307 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 C17orf107Q6ZR85 190 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 NANOGP1Q8N7R0 232 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 TMEM106AQ96A25 262 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 FAM234AQ9H0X4 552 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 HMG20AQ9NP66 347 aa22.75■■□□□ 1.23
SCARF1-207ENST00000573867 PNMA8CA0A1B0GUJ8 204 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 H0YHG0 523 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 CDK1P06493 297 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 MYF6P23409 242 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 RPL31P62899 125 aaKnown RBP22.74■■□□□ 1.23
SCARF1-207ENST00000573867 ZNF273Q14593 569 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 ZNF146Q15072 292 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 SLC9A3R2Q15599 337 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 METAP1DQ6UB28 335 aaPredicted RBP22.74■■□□□ 1.23
SCARF1-207ENST00000573867 C11orf42Q8N5U0 333 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 OR52N4Q8NGI2 321 aa22.74■■□□□ 1.23
SCARF1-207ENST00000573867 SEBOXQ9HB31 216 aaPredicted RBP22.74■■□□□ 1.23
SCARF1-207ENST00000573867 MYL12BO14950 172 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 RAB3AP20336 220 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 PRTN3P24158 256 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 WNT4P56705 351 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 HCP5Q6MZN7 132 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 IZUMO2Q6UXV1 221 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 C1orf122Q6ZSJ8 110 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 SAXO1Q8IYX7 474 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 PNKDQ8N490 385 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 ANKRD60Q9BZ19 345 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 UNKLQ9H9P5 680 aaKnown RBP22.73■■□□□ 1.23
SCARF1-207ENST00000573867 NEK6Q9HC98 313 aa22.73■■□□□ 1.23
SCARF1-207ENST00000573867 A0A0U1RQK1 487 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 PTGES3LE9PB15 166 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 GABRPO00591 440 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 PSPNO60542 156 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 CCL3L1P16619 93 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 ERVFRD-1P60508 538 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 METTL8Q9H825 291 aaKnown RBP22.72■■□□□ 1.23
SCARF1-207ENST00000573867 PCDHGB5Q9Y5G0 923 aa22.72■■□□□ 1.23
SCARF1-207ENST00000573867 TENM1Q9UKZ4 2725 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 A0A1W2PRD5 423 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 A0A1W2PRF3 423 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 A0A1W2PRM7 423 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 MEX3AA1L020 520 aaKnown RBP22.71■■□□□ 1.23
SCARF1-207ENST00000573867 HOXA3O43365 443 aaPredicted RBP22.71■■□□□ 1.23
SCARF1-207ENST00000573867 ATP6V1G2O95670 118 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 CD2P06729 351 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 TMEM225BP0DP42 221 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 TCF23Q7RTU1 214 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 OR8H2Q8N162 312 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 ZSCAN4Q8NAM6 433 aaPredicted RBP22.71■■□□□ 1.23
SCARF1-207ENST00000573867 SNX22Q96L94 193 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 CHST6Q9GZX3 395 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 GSTK1Q9Y2Q3 226 aa22.71■■□□□ 1.23
SCARF1-207ENST00000573867 IGFBP3P17936 291 aaPredicted RBP22.7■■□□□ 1.22
SCARF1-207ENST00000573867 DLX6P56179 175 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 TAS2R43P59537 309 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 SLC35A2P78381 396 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 YIF1BQ5BJH7 314 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 SPIN3Q5JUX0 258 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 RNLSQ5VYX0 342 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 Q6YL49 198 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 OR4S1Q8NGB4 309 aa22.7■■□□□ 1.22
SCARF1-207ENST00000573867 LSM2Q9Y333 95 aaKnown RBP22.7■■□□□ 1.22
SCARF1-207ENST00000573867 TRAV8-7A0A075B6U6 113 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 TRBV5-7A0A0A0MS05 114 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 MAGEA13PA6NCF6 341 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 CLDN34H7C241 214 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 RNASE1P07998 156 aaKnown RBP22.69■■□□□ 1.22
SCARF1-207ENST00000573867 MELTFP08582 738 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 CELP19835 753 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 ACTG1P63261 375 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 RIPK1Q13546 671 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 Q499Y3 187 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 FIP1L1Q6UN15 594 aaKnown RBP22.69■■□□□ 1.22
SCARF1-207ENST00000573867 SATL1Q86VE3 508 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 ZDHHC16Q969W1 377 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 OR14A2Q96R54 314 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 OR5M11Q96RB7 305 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 CDCA4Q9BXL8 241 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 VCX3BQ9H321 246 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 ERGIC3Q9Y282 383 aa22.69■■□□□ 1.22
SCARF1-207ENST00000573867 SIRPB1O00241 398 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 OR2H2O95918 312 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 GABRR1P24046 479 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 OR3A1P47881 315 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 EDDM3BP56851 147 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 EDDM3AQ14507 147 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 IRF3Q14653 427 aa22.68■■□□□ 1.22
SCARF1-207ENST00000573867 TPRX1Q8N7U7 411 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms