RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 NUDT22Q9BRQ3 303 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 HDHD3Q9BSH5 251 aaPredicted RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 DKKL1Q9UK85 242 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 HS3ST3A1Q9Y663 406 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 COL5A1P20908 1838 aaPredicted RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 LIPT2A6NK58 231 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 CLDN34H7C241 214 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 RER1O15258 196 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 CDS2O95674 445 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 ASCL1P50553 236 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 FXYD4P59646 89 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 JOSD1Q15040 202 aaPredicted RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 TAF9Q16594 264 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 PHLDA2Q53GA4 152 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 ZNF385CQ66K41 422 aaPredicted RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 DPPA3Q6W0C5 159 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 UEVLDQ8IX04 471 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 ABHD14AQ9BUJ0 271 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 ANGPTL4Q9BY76 406 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 DUSP15Q9H1R2 295 aaPredicted RBP13.45□□□□□ -0.26
SMG6-207ENST00000570756 LIME1Q9H400 295 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 PLEKHF2Q9H8W4 249 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 ADAMTS9Q9P2N4 1935 aa13.45□□□□□ -0.26
SMG6-207ENST00000570756 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 VSTM2BA6NLU5 285 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 B4DGG1 531 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 ZNF732B4DXR9 585 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 TCAPO15273 167 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
SMG6-207ENST00000570756 RND2P52198 227 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 SRPXP78539 464 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 TSPO2Q5TGU0 170 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 CRIP3Q6Q6R5 217 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 SLC22A18ASQ8N1D0 253 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 CLDND2Q8NHS1 167 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 RNASEH2CQ8TDP1 164 aaKnown RBP13.44□□□□□ -0.26
SMG6-207ENST00000570756 Q96M66 194 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 NEU1Q99519 415 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 CRLF2Q9HC73 371 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 PNRC2Q9NPJ4 139 aaKnown RBP13.44□□□□□ -0.26
SMG6-207ENST00000570756 B3GALT1Q9Y5Z6 326 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 FAM24AA6NFZ4 105 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 A8MWP6 167 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 PHF1O43189 567 aaPredicted RBP13.44□□□□□ -0.26
SMG6-207ENST00000570756 QDPRP09417 244 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 CDAP32320 146 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 CAPZBP47756 277 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 DMRTC1Q5HYR2 192 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 OR1N1Q8NGS0 311 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 NDUFAF3Q9BU61 184 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 HIPK2Q9H2X6 1198 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 SLC7A11Q9UPY5 501 aa13.44□□□□□ -0.26
SMG6-207ENST00000570756 PHOX2AO14813 284 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 DHRS3O75911 302 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 PGA4P0DJD7 388 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 PGA3P0DJD8 388 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 FOLR1P15328 257 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 NOVA1P51513 510 aaKnown RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 SUMO3P55854 103 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 SP5Q6BEB4 398 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 TMEM183AQ8IXX5 376 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 BEND2Q8NDZ0 799 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 MVB12AQ96EY5 273 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 SNX22Q96L94 193 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 SPIN2AQ99865 258 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 SPIN2BQ9BPZ2 258 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 SMOC1Q9H4F8 434 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 DCAF16Q9NXF7 216 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 B3GAT1Q9P2W7 334 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 MTCH2Q9Y6C9 303 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 IGSF23A1L1A6 192 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 CYB5R3P00387 301 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 DBHP09172 617 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 CD200P41217 278 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 NKX2-1P43699 371 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 VAMP2P63027 116 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 C17orf67Q0P5P2 114 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 C1orf61Q13536 156 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 NSDHLQ15738 373 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 C4orf17Q53FE4 359 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 TGIF2LXQ8IUE1 241 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 SLC35G3Q8N808 338 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 ZNF441Q8N8Z8 693 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 LIN37Q96GY3 246 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 LYRM2Q9NU23 88 aaPredicted RBP13.43□□□□□ -0.26
SMG6-207ENST00000570756 DNAH14Q0VDD8 3507 aa13.43□□□□□ -0.26
SMG6-207ENST00000570756 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 H3BML4 177 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 OPN1MWP04001 364 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 OPN1MW2P0DN77 364 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 OPN1MW3P0DN78 364 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 GLI4P10075 376 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 ANOS1P23352 680 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 UCP3P55916 312 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 CMTM1Q8IZ96 169 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 OR5L2Q8NGL0 311 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 MRGPRX1Q96LB2 322 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 FAAP24Q9BTP7 215 aa13.42□□□□□ -0.26
SMG6-207ENST00000570756 GPR87Q9BY21 358 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms