RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 TVP23BQ9NYZ1 205 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 COMMD3Q9UBI1 195 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 A4GNTQ9UNA3 340 aa9.05□□□□□ -0.96
CDH3-208ENST00000569036 A0A0G2JPF8 293 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 HNRNPCL2B2RXH8 293 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 HNRNPCL3B7ZW38 293 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 KRBOX1C9JBD0 128 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 F5H5P2 479 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 M0R129 80 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 GABRPO00591 440 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 PLPP3O14495 311 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 HPGDSO60760 199 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 ECDO95905 644 aaPredicted RBP9.04□□□□□ -0.96
CDH3-208ENST00000569036 CD1AP06126 327 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 DUX4L4P0CJ87 422 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 LIMS3P0CW19 117 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 LIMS4P0CW20 117 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 PGA4P0DJD7 388 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 PGA3P0DJD8 388 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 SULT1A3P0DMM9 295 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 SULT1A4P0DMN0 295 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 HNRNPCL4P0DMR1 293 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 IRF2P14316 349 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 ZP3P21754 424 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 FPR3P25089 353 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 PAX6P26367 422 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 FABP5Q01469 135 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 MXD1Q05195 221 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 GPR176Q14439 515 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 MELKQ14680 651 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 TRAM2Q15035 370 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 AANATQ16613 207 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 RPL13AP3Q6NVV1 102 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 SLC35D2Q76EJ3 337 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 Q8N7P7 452 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 UXS1Q8NBZ7 420 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 OR56B4Q8NH76 319 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 PHYHIPQ92561 330 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 TNFRSF14Q92956 283 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 HAVCR1Q96D42 359 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 SLC25A44Q96H78 314 aaPredicted RBP9.04□□□□□ -0.96
CDH3-208ENST00000569036 AJUBAQ96IF1 538 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 MOGAT1Q96PD6 335 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 WNT5BQ9H1J7 359 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 OR51J1Q9H342 316 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 ABRACLQ9P1F3 81 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 SLC23A1Q9UHI7 598 aa9.04□□□□□ -0.96
CDH3-208ENST00000569036 RPS10-NUDT3A0A1W2PQS6 291 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 C11orf98E9PRG8 122 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 DVL1O14640 695 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 FABP7O15540 132 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 MLNRO43193 412 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 MTRF1O75570 445 aaKnown RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 ABHD16AO95870 558 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 LALBAP00709 142 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 SERPINA3P01011 423 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 IGF2P01344 180 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 BCHEP06276 602 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 CLEC2LP0C7M8 214 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 VDAC2P45880 294 aaPredicted RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 HTR5AP47898 357 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 ZNF84P51523 738 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 UBE2E1P51965 193 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 GBX2P52951 348 aaPredicted RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 AP3S2P59780 193 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 RPS7P62081 194 aaKnown RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 ERVK-25P63136 954 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 MRPS10P82664 201 aaKnown RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 ARSJQ5FYB0 599 aaPredicted RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 CLEC12AQ5QGZ9 265 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 AADACL4Q5VUY2 407 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 Q6ZS46 218 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 SLC38A6Q8IZM9 456 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 CMTM4Q8IZR5 234 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 FGFRL1Q8N441 504 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 LY6G5BQ8NDX9 201 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 OR6S1Q8NH40 331 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 Q8TCH9 128 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 PIFOQ8TCI5 191 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 ST8SIA4Q92187 359 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 MCHR2Q969V1 340 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 THAP7Q9BT49 309 aaPredicted RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 WACQ9BTA9 647 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 PRSS22Q9GZN4 317 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 HDHD2Q9H0R4 259 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 ABCG5Q9H222 651 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 ZMAT4Q9H898 229 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 TRIM36Q9NQ86 728 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 EXTL2Q9UBQ6 330 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 MGAT4AQ9UM21 535 aa9.03□□□□□ -0.96
CDH3-208ENST00000569036 ZNF443Q9Y2A4 671 aaPredicted RBP9.03□□□□□ -0.96
CDH3-208ENST00000569036 TRBV23-1A0A0A0MS06 115 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 LINC00854A0A1B0GVQ3 168 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 LRRN3E7EW58 273 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 LGALS8O00214 317 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 SOX14O95416 240 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 CDAP32320 146 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 ST3GAL3Q11203 375 aa9.02□□□□□ -0.97
CDH3-208ENST00000569036 CNN3Q15417 329 aaKnown RBP9.02□□□□□ -0.97
CDH3-208ENST00000569036 KHDC1LQ5JSQ8 128 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms