RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 CXorf65A6NEN9 183 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 WIPF3A6NGB9 483 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 H0YIZ8 118 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 RPL36A-HNRNPH2H7BZ11 118 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 NUPL2O15504 423 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 PHF1O43189 567 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SOX15O60248 233 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CYTIPO60759 359 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 PITX3O75364 302 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 NDUFS6O75380 124 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 MRPL33O75394 65 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ACTL6AO96019 429 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 IFNA1P01562 189 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SERPINA7P05543 415 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SMIM6P0DI80 62 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SPP1P10451 314 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 COX6A1P12074 109 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 VDAC1P21796 283 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SDHBP21912 280 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CD80P33681 288 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 PTGER4P35408 488 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SNCAP37840 140 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CD200P41217 278 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CYB561P49447 251 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 UCP2P55851 309 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 RBM11P57052 281 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CD81P60033 236 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF616Q08AN1 781 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 GUK1Q16774 197 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 AKR1C8PQ5T2L2 129 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 PRAMEF20Q5VT98 475 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 OTPQ5XKR4 325 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ABLIM2Q6H8Q1 611 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SLC22A25Q6T423 547 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF574Q6ZN55 896 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 MRPL21Q7Z2W9 205 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 C6orf201Q7Z4U5 140 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF573Q86YE8 665 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 OR2C3Q8N628 320 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SUMF2Q8NBJ7 301 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 Q8NFD4 153 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 OR5A2Q8NGI9 324 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 TCEAL3Q969E4 200 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 APOBEC3DQ96AK3 386 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF837Q96EG3 531 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ABHD17AQ96GS6 310 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 ZC3H10Q96K80 434 aaKnown RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 LYZL4Q96KX0 146 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 TAAR9Q96RI9 348 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 C1QTNF5Q9BXJ0 243 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 OR2H1Q9GZK4 316 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 MS4A7Q9GZW8 240 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-249ENST00000564606 IFT22Q9H7X7 185 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 FN3KRPQ9HA64 309 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 CRLF2Q9HC73 371 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 RPS10P5Q9NQ39 176 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SIRT7Q9NRC8 400 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 SLC2A9Q9NRM0 540 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 C19orf12Q9NSK7 152 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 AK3Q9UIJ7 227 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 MPC1Q9Y5U8 109 aa6.64□□□□□ -1.35
ATXN3-249ENST00000564606 hCG_38984A0A1B0GV85 526 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 A0A1W2PQM1 296 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 OR5H15A6NDH6 313 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 OR5B21A6NL26 309 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ANKRD30BLA7E2S9 258 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TRDCB7Z8K6 153 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 SHISA8B8ZZ34 492 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ZNF587BE7ETH6 402 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 M0R036 132 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TERTO14746 1132 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TNFSF11O14788 317 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 MSTNO14793 375 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ATXN7O15265 892 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 MPPED1O15442 326 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ZIC3O60481 467 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TDRD6O60522 2096 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 PPYP01298 95 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 WNT2P09544 360 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 OR5AC1P0C628 307 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 MUC1P15941 1255 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 NME2P22392 152 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 APLNRP35414 380 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 FGF12P61328 243 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 HBG1P69891 147 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 HBG2P69892 147 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 PNRC1Q12796 327 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 IL24Q13007 206 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 CLINT1Q14677 625 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 RNPS1Q15287 305 aaKnown RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 TAF9Q16594 264 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 HLA-BQ31612 363 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 KRTAP27-1Q3LI81 207 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 ACSF3Q4G176 576 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 SOHLH1Q5JUK2 328 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 SPIN3Q5JUX0 258 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 PMS2CLQ68D20 193 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 SLC25A24Q6NUK1 477 aa6.63□□□□□ -1.35
ATXN3-249ENST00000564606 C16orf47Q6ZP98 133 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-249ENST00000564606 FOXRED2Q8IWF2 684 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms