RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 OR8H2Q8N162 312 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 FAM58AQ8N1B3 248 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 BEND2Q8NDZ0 799 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 MYCBPQ99417 103 aaPredicted RBP16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 PDCD1LG2Q9BQ51 273 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 CHST6Q9GZX3 395 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 MRPS18AQ9NVS2 196 aaKnown RBP16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 MGAM2Q2M2H8 2515 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 DSCAML1Q8TD84 2053 aa16.26■□□□□ 0.19
SHCBP1-203ENST00000564272 IGKV1-12A0A0C4DH73 117 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 IGKV1D-12P01611 117 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 LIMS3P0CW19 117 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 LIMS4P0CW20 117 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 GABRR1P24046 479 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 DHRS7BQ6IAN0 325 aaPredicted RBP16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 Q6ZSV7 163 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 OR52N4Q8NGI2 321 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 OR5R1Q8NH85 324 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 CNIH3Q8TBE1 160 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 SNX22Q96L94 193 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 RDH12Q96NR8 316 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 ZNF696Q9H7X3 374 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 HEXA-AS1Q9H8Q6 139 aa16.25■□□□□ 0.19
SHCBP1-203ENST00000564272 hCG_1809904A0A1W2PP81 198 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 A0A1W2PPE2 198 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 A0A1W2PR64 198 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 A0A1W2PRV1 198 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 TMEM212A6NML5 194 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 C17orf98A8MV24 154 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 H3BUX3 64 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 PSPNO60542 156 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 MT-ND2P03891 347 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 KLHL22Q53GT1 634 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 LPCAT4Q643R3 524 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 CRIP3Q6Q6R5 217 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 TPRX1Q8N7U7 411 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 OR5AK2Q8NH90 309 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 LINC01006Q8NI28 216 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 TSEN15Q8WW01 171 aaKnown RBP16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 COMMD4Q9H0A8 199 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 ZCCHC4Q9H5U6 513 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 NEK6Q9HC98 313 aa16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.24■□□□□ 0.19
SHCBP1-203ENST00000564272 SIRPB1O00241 398 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 CCDC159P0C7I6 412 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 ZNF728P0DKX0 622 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 PEX2P28328 305 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 GTF2A1P52655 376 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 GBX2P52951 348 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 KRTAP10-3P60369 221 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 MRPL28Q13084 256 aaKnown RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 ZNF146Q15072 292 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 GRK1Q15835 563 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 ZNF691Q5VV52 312 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 ZSCAN4Q8NAM6 433 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 OR4S1Q8NGB4 309 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 CYGBQ8WWM9 190 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 SSX3Q99909 188 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 SEBOXQ9HB31 216 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 HMG20AQ9NP66 347 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 FGF20Q9NP95 211 aaPredicted RBP16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 GSTK1Q9Y2Q3 226 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 RNF114Q9Y508 228 aa16.23■□□□□ 0.19
SHCBP1-203ENST00000564272 KDM4BO94953 1096 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 HCKP08631 526 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 OR3A1P47881 315 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 ETV1P50549 477 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 RCN1Q15293 331 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 LY6EQ16553 131 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 LRRC75BQ2VPJ9 315 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 SPIN3Q5JUX0 258 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 XAF1Q6GPH4 301 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 BRICD5Q6PL45 260 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 LHFPL4Q7Z7J7 247 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 RGP1Q92546 391 aaPredicted RBP16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 ZNF714Q96N38 554 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 JAM3Q9BX67 310 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 PPA2Q9H2U2 334 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 DHDHQ9UQ10 334 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 TRRAPQ9Y4A5 3859 aa16.22■□□□□ 0.19
SHCBP1-203ENST00000564272 SULT1B1O43704 296 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 LGALS4P56470 323 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 MEF2CQ06413 473 aaPredicted RBP16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 IL18R1Q13478 541 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 OR2G6Q5TZ20 316 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 SERPINA12Q8IW75 414 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 PARP16Q8N5Y8 322 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 MEGF9Q9H1U4 602 aa16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 EXOSC4Q9NPD3 245 aaKnown RBP16.21■□□□□ 0.19
SHCBP1-203ENST00000564272 hADV38S2A0JD32 116 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 ODF3BA8MYP8 253 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 OR2H2O95918 312 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 RBP4P02753 201 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 ARG1P05089 322 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 IGHV1-8P0DP01 117 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 TGFBR2P37173 567 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 SOX2P48431 317 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 PROK1P58294 105 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 ZP1P60852 638 aa16.2■□□□□ 0.18
SHCBP1-203ENST00000564272 PLA1AQ53H76 456 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms