RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 ISG15P05161 165 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 RBP2P50120 134 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 ATP1B3P54709 279 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 MTCP1P56278 107 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 ALKBH1Q13686 389 aaKnown RBP20.49■□□□□ 0.87
NME3-202ENST00000561637 UTS2BQ765I0 119 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 PQLC1Q8N2U9 271 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 DNAAF1Q8NEP3 725 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 OR5D18Q8NGL1 313 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 OR13C9Q8NGT0 318 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 OR5R1Q8NH85 324 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 RHOXF1Q8NHV9 184 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 FAM110DQ8TAY7 271 aaPredicted RBP20.49■□□□□ 0.87
NME3-202ENST00000561637 PIFOQ8TCI5 191 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 APH1BQ8WW43 257 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 C10orf35Q96D05 121 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 C9orf16Q9BUW7 83 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 HEXA-AS1Q9H8Q6 139 aa20.49■□□□□ 0.87
NME3-202ENST00000561637 TSPAN9O75954 239 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 JUNBP17275 347 aaPredicted RBP20.48■□□□□ 0.87
NME3-202ENST00000561637 PRKACAP17612 351 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 LRRC75BQ2VPJ9 315 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 SLC35E4Q6ICL7 350 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 KCTD20Q7Z5Y7 419 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 OR8H2Q8N162 312 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 OR4S1Q8NGB4 309 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 OR13C3Q8NGS6 347 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 MEGF9Q9H1U4 602 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 HHLA2Q9UM44 414 aa20.48■□□□□ 0.87
NME3-202ENST00000561637 TRBV2A0A0J9YWF9 115 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 CHST1O43916 411 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 ZNF728P0DKX0 622 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 CCR9P51686 369 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 GALEQ14376 348 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 ZBTB49Q6ZSB9 765 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 GDPD3Q7L5L3 318 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 FAM58AQ8N1B3 248 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 ZNF676Q8N7Q3 588 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 SNX22Q96L94 193 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 OPALINQ96PE5 141 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 FAM118AQ9NWS6 357 aa20.47■□□□□ 0.87
NME3-202ENST00000561637 LOC100130705A0A1B0GUX0 176 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 A0A1W2PPH5 198 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 SIRPB1O00241 398 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 PRKACBP22694 351 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 GABRR1P24046 479 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 TGFBR2P37173 567 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 OR3A1P47881 315 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 RAB13P51153 203 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 PDZK1IP1Q13113 114 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 GRK1Q15835 563 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 SMN1Q16637 294 aaKnown RBP20.46■□□□□ 0.87
NME3-202ENST00000561637 OR52I1Q8NGK6 324 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 PDCD1LG2Q9BQ51 273 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 TCF7L1Q9HCS4 588 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 ERVK13-1Q9NX77 482 aa20.46■□□□□ 0.87
NME3-202ENST00000561637 PLXNB1O43157 2135 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 ODF3BA8MYP8 253 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 MMP23AO75900 390 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 ACTA2P62736 377 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 ACTG2P63267 376 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 BAIAP2L2Q6UXY1 529 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 LHFPL2Q6ZUX7 228 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 KIAA2026Q5HYC2 2103 aa20.45■□□□□ 0.86
NME3-202ENST00000561637 FAM90A8PA6NJQ4 464 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 ZFPL1O95159 310 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 BAG2O95816 211 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 PRB2P02812 416 aaPredicted RBP20.44■□□□□ 0.86
NME3-202ENST00000561637 ARG1P05089 322 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 IGHV1-8P0DP01 117 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 RGP1Q92546 391 aaPredicted RBP20.44■□□□□ 0.86
NME3-202ENST00000561637 SPSB1Q96BD6 273 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 NKX3-1Q99801 234 aaPredicted RBP20.44■□□□□ 0.86
NME3-202ENST00000561637 HMG20AQ9NP66 347 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 GSTK1Q9Y2Q3 226 aa20.44■□□□□ 0.86
NME3-202ENST00000561637 TET2Q6N021 2002 aaPredicted RBP20.44■□□□□ 0.86
NME3-202ENST00000561637 hCG_1809904A0A1W2PP81 198 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 A0A1W2PPE2 198 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 A0A1W2PR64 198 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 A0A1W2PRV1 198 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 G3V4G9 280 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 WBP4O75554 376 aaKnown RBP20.43■□□□□ 0.86
NME3-202ENST00000561637 GTF2A1P52655 376 aaPredicted RBP20.43■□□□□ 0.86
NME3-202ENST00000561637 LGALS4P56470 323 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 ZNF146Q15072 292 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 BEAN1Q3B7T3 259 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 LPCAT4Q643R3 524 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 XAF1Q6GPH4 301 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 Q6ZPA2 131 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 Q8IYB0 196 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 SYS1Q8N2H4 156 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 ZNF714Q96N38 554 aa20.43■□□□□ 0.86
NME3-202ENST00000561637 SNTNA6NMZ2 147 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 EBAG9O00559 213 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 CLIC3O95833 236 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 LIMS3P0CW19 117 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 LIMS4P0CW20 117 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 GABRA5P31644 462 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 IL18R1Q13478 541 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 ZNF626Q68DY1 528 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms