RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 SMN1Q16637 294 aaKnown RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 MICBQ29980 383 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 TRIM16LQ309B1 348 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 DHRS7BQ6IAN0 325 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 Q6ZPA2 131 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 C1orf122Q6ZSJ8 110 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 RASSF6Q6ZTQ3 369 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 DPY19L4Q7Z388 723 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ZNF554Q86TJ5 538 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 TIGD4Q8IY51 512 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 BEND2Q8NDZ0 799 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OR8S1Q8NH09 359 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MCFD2Q8NI22 146 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 TEX47Q8TBZ9 253 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 WIPF2Q8TF74 440 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 NPRL2Q8WTW4 380 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OR5P3Q8WZ94 311 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 RPL3LQ92901 407 aaKnown RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 UBE2FQ969M7 185 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MGLLQ99685 303 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 JAM3Q9BX67 310 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 TSSK6Q9BXA6 273 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 OPA3Q9H6K4 179 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 SP140LQ9H930 580 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ELL3Q9HB65 397 aaPredicted RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 C14orf119Q9NWQ9 140 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 HAO2Q9NYQ3 351 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 FBLN5Q9UBX5 448 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 ADAM30Q9UKF2 790 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 DIMT1Q9UNQ2 313 aaKnown RBP4.71□□□□□ -1.66
USP3-215ENST00000559771 FOXJ3Q9UPW0 622 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 KLHDC2Q9Y2U9 406 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MAB21L2Q9Y586 359 aa4.71□□□□□ -1.66
USP3-215ENST00000559771 MEIOCA2RUB1 952 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 METTL15A6NJ78 407 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 FAM183AA6NL82 134 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 ZNF850A8MQ14 1090 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 PRR32B1ATL7 298 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 LOC110117498-PIK3R3F6TDL0 507 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 H3BUX3 64 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 M0R1W7 72 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 SIGLEC5O15389 551 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 PRODHO43272 600 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 AKR7A2O43488 359 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 NDUFB3O43676 98 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 SOX14O95416 240 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 CST4P01036 141 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OPN1MWP04001 364 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 ANXA2P07355 339 aaKnown RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 ACAA1P09110 424 aaPredicted RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 OPN1MW2P0DN77 364 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OPN1MW3P0DN78 364 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 DBTP11182 482 aaKnown RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 MYL12AP19105 171 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 KIR2DS4P43632 304 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 CAV3P56539 151 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 GMFBP60983 142 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 VBP1P61758 197 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 NCS1P62166 190 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 GRB2P62993 217 aaKnown RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 MZT1Q08AG7 82 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 ACSM1Q08AH1 577 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 PRDX4Q13162 271 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 GPR50Q13585 617 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 EIF2B1Q14232 305 aaKnown RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 HERPUD1Q15011 391 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 TAF13Q15543 124 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 C2orf68Q2NKX9 166 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 DMRTC1Q5HYR2 192 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 LDLRAD2Q5SZI1 272 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 FAM57BQ71RH2 274 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 SLC36A1Q7Z2H8 476 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 EGFL6Q8IUX8 553 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 DYNAPQ8N1N2 210 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 CENPSQ8N2Z9 138 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 MFSD4AQ8N468 514 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 IQCF1Q8N6M8 205 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 NANOGP1Q8N7R0 232 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 C11orf44Q8N8P7 122 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 ZNRF1Q8ND25 227 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OR52L1Q8NGH7 329 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OR6K6Q8NGW6 343 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OR10Z1Q8NGY1 313 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 NDNFQ8TB73 568 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 TMEM163Q8TC26 289 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 CCDC32Q9BV29 185 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 DNTTIP1Q9H147 329 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 MEGF9Q9H1U4 602 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 PPA2Q9H2U2 334 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 OR51I2Q9H344 312 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 FGF20Q9NP95 211 aaPredicted RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 CMC2Q9NRP2 79 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 C19orf12Q9NSK7 152 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 NDUFB11Q9NX14 153 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 DNAJC27Q9NZQ0 273 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 SLC25A10Q9UBX3 287 aaPredicted RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 ZNF391Q9UJN7 358 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 BAIAP2Q9UQB8 552 aa4.7□□□□□ -1.66
USP3-215ENST00000559771 LSM2Q9Y333 95 aaKnown RBP4.7□□□□□ -1.66
USP3-215ENST00000559771 EXOSC1Q9Y3B2 195 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms