RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 A0A0A6YYD4 124 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 TRAV1-2A0A0B4J238 106 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 LOC100506127A0A0U1RQW1 187 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 MEX3AA1L020 520 aaKnown RBP9.02□□□□□ -0.97
TPM1-217ENST00000559108 SLC22A1O15245 554 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 KNG1P01042 644 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 TGFAP01135 160 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 MSMBP08118 114 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 SLC2A2P11168 524 aaPredicted RBP9.02□□□□□ -0.97
TPM1-217ENST00000559108 GALP22466 123 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 GABRA2P47869 451 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 GZMKP49863 264 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 FGF12P61328 243 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 NCS1P62166 190 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 LSM3P62310 102 aaKnown RBP9.02□□□□□ -0.97
TPM1-217ENST00000559108 COL10A1Q03692 680 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 UNC119Q13432 240 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 ZNF146Q15072 292 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 P2RY14Q15391 338 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 SMIM21Q3B7S5 101 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 SLC22A6Q4U2R8 563 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 ELP2Q6IA86 826 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 GLIPR1L1Q6UWM5 242 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 CLEC9AQ6UXN8 241 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 TCF23Q7RTU1 214 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 MKXQ8IYA7 352 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 NKAIN3Q8N8D7 197 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 LINC01356Q8N9X3 169 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 OR4S1Q8NGB4 309 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 RAB39BQ96DA2 213 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 SSBP3Q9BWW4 388 aaPredicted RBP9.02□□□□□ -0.97
TPM1-217ENST00000559108 SHARPINQ9H0F6 387 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 EXOSC4Q9NPD3 245 aaKnown RBP9.02□□□□□ -0.97
TPM1-217ENST00000559108 IL36GQ9NZH8 169 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 MIOXQ9UGB7 285 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 PCDHB10Q9UN67 800 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 ING4Q9UNL4 249 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 GSTK1Q9Y2Q3 226 aa9.02□□□□□ -0.97
TPM1-217ENST00000559108 SIRPB1O00241 398 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 LDLRAD4O15165 306 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 ARL6IP5O75915 188 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 HTR3BO95264 441 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 HAND1O96004 215 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 HEXAP06865 529 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 VSIG8P0DPA2 414 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 SERPINA2P20848 420 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 OR3A1P47881 315 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 DLX1P56177 255 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 GNB2P62879 340 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 PRB3Q04118 309 aaPredicted RBP9.01□□□□□ -0.97
TPM1-217ENST00000559108 HES5Q5TA89 166 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 CYB5R2Q6BCY4 276 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 IL17RELQ6ZVW7 336 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 CDH26Q8IXH8 852 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 OR8B3Q8NGG8 313 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 OR51T1Q8NGJ9 327 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 TBC1D15Q8TC07 691 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 ST8SIA4Q92187 359 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 THRSPQ92748 146 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 FAM46BQ96A09 425 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 TMEM186Q96B77 213 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 OR8B2Q96RD0 313 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 TMPRSS13Q9BYE2 586 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 BANF2Q9H503 90 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 C19orf12Q9NSK7 152 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 OPN4Q9UHM6 478 aa9.01□□□□□ -0.97
TPM1-217ENST00000559108 POLR3KQ9Y2Y1 108 aaPredicted RBP9.01□□□□□ -0.97
TPM1-217ENST00000559108 TRAV24A0A0B4J272 114 aa9□□□□□ -0.97
TPM1-217ENST00000559108 B4DSR2 109 aa9□□□□□ -0.97
TPM1-217ENST00000559108 SLC33A1O00400 549 aaPredicted RBP9□□□□□ -0.97
TPM1-217ENST00000559108 SLC17A2O00624 439 aa9□□□□□ -0.97
TPM1-217ENST00000559108 GEMIN2O14893 280 aaKnown RBP9□□□□□ -0.97
TPM1-217ENST00000559108 MAGEB3O15480 346 aa9□□□□□ -0.97
TPM1-217ENST00000559108 OR2H2O95918 312 aa9□□□□□ -0.97
TPM1-217ENST00000559108 SDC2P34741 201 aa9□□□□□ -0.97
TPM1-217ENST00000559108 MTNR1BP49286 362 aa9□□□□□ -0.97
TPM1-217ENST00000559108 EFNB2P52799 333 aa9□□□□□ -0.97
TPM1-217ENST00000559108 DVL1P1P54792 670 aaPredicted RBP9□□□□□ -0.97
TPM1-217ENST00000559108 RBM11P57052 281 aaKnown RBP9□□□□□ -0.97
TPM1-217ENST00000559108 IL13RA1P78552 427 aa9□□□□□ -0.97
TPM1-217ENST00000559108 MXD1Q05195 221 aa9□□□□□ -0.97
TPM1-217ENST00000559108 RSU1Q15404 277 aa9□□□□□ -0.97
TPM1-217ENST00000559108 CTF1Q16619 201 aa9□□□□□ -0.97
TPM1-217ENST00000559108 ESCO2Q56NI9 601 aa9□□□□□ -0.97
TPM1-217ENST00000559108 AWAT2Q6E213 333 aa9□□□□□ -0.97
TPM1-217ENST00000559108 SIGIRRQ6IA17 410 aa9□□□□□ -0.97
TPM1-217ENST00000559108 BTN2A1Q7KYR7 527 aa9□□□□□ -0.97
TPM1-217ENST00000559108 TPRX1Q8N7U7 411 aa9□□□□□ -0.97
TPM1-217ENST00000559108 TMEM185AQ8NFB2 350 aa9□□□□□ -0.97
TPM1-217ENST00000559108 UQCC2Q9BRT2 126 aa9□□□□□ -0.97
TPM1-217ENST00000559108 NICN1Q9BSH3 213 aa9□□□□□ -0.97
TPM1-217ENST00000559108 DCTN5Q9BTE1 182 aa9□□□□□ -0.97
TPM1-217ENST00000559108 CHST6Q9GZX3 395 aa9□□□□□ -0.97
TPM1-217ENST00000559108 DNTTIP1Q9H147 329 aa9□□□□□ -0.97
TPM1-217ENST00000559108 YAE1D1Q9NRH1 226 aa9□□□□□ -0.97
TPM1-217ENST00000559108 HIF1ANQ9NWT6 349 aa9□□□□□ -0.97
TPM1-217ENST00000559108 SLC25A10Q9UBX3 287 aaPredicted RBP9□□□□□ -0.97
TPM1-217ENST00000559108 CLN8Q9UBY8 286 aa9□□□□□ -0.97
TPM1-217ENST00000559108 INSIG2Q9Y5U4 225 aa9□□□□□ -0.97
TPM1-217ENST00000559108 IGHV2-70DA0A0C4DH43 119 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms