RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 C22orf46C9J442 243 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
LINC01220-201ENST00000558575 AVPP01185 164 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 SRMP19623 302 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
LINC01220-201ENST00000558575 ZNF93P35789 620 aaPredicted RBP12.84□□□□□ -0.35
LINC01220-201ENST00000558575 PTGFRP43088 359 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 GABRA2P47869 451 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 TRAM1Q15629 374 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 NEDD8Q15843 81 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 SMIM21Q3B7S5 101 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 ESCO2Q56NI9 601 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 NLRC3Q7RTR2 1065 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 FAM58AQ8N1B3 248 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 Q8NFD4 153 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 PXT1Q8NFP0 134 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 TNFAIP8L1Q8WVP5 186 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 THRSPQ92748 146 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 MUL1Q969V5 352 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 HMG20AQ9NP66 347 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 CKLFQ9UBR5 152 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 CLN8Q9UBY8 286 aa12.84□□□□□ -0.35
LINC01220-201ENST00000558575 A0A087WXM4 84 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 PPIAL4CA0A0B4J2A2 164 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 SHISA3A0PJX4 238 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 CCRL2O00421 344 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 SIGLEC5O15389 551 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 MAGEB3O15480 346 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 CDRT1O95170 752 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 KNG1P01042 644 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 PSMA1P25786 263 aaKnown RBP12.83□□□□□ -0.36
LINC01220-201ENST00000558575 DUSP1P28562 367 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 GNB2P62879 340 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 ACTG1P63261 375 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 HSD17B12Q53GQ0 312 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 C1orf229Q6ZS94 237 aaPredicted RBP12.83□□□□□ -0.36
LINC01220-201ENST00000558575 GLCCI1Q86VQ1 547 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 CDH26Q8IXH8 852 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 ZNRF1Q8ND25 227 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 ZFAND2BQ8WV99 257 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 PHYHIPQ92561 330 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 EMG1Q92979 244 aaKnown RBP12.83□□□□□ -0.36
LINC01220-201ENST00000558575 GPER1Q99527 375 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 GFI1Q99684 422 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 CNTD2Q9H8S5 307 aa12.83□□□□□ -0.36
LINC01220-201ENST00000558575 DOCK11Q5JSL3 2073 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 TRDV1A0A1B0GX56 115 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 CYB5AP00167 134 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 SMIM18P0DKX4 95 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 PRKACAP17612 351 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 IKZF1Q13422 519 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 ELP2Q6IA86 826 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 SLC36A1Q7Z2H8 476 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 Q8IYB0 196 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 OR4D6Q8NGJ1 314 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 OR10K1Q8NGX5 313 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 MED30Q96HR3 178 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 C1orf147Q96MC9 270 aaPredicted RBP12.82□□□□□ -0.36
LINC01220-201ENST00000558575 NR1H4Q96RI1 486 aaPredicted RBP12.82□□□□□ -0.36
LINC01220-201ENST00000558575 TMPRSS13Q9BYE2 586 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 SEBOXQ9HB31 216 aaPredicted RBP12.82□□□□□ -0.36
LINC01220-201ENST00000558575 TCF7L1Q9HCS4 588 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 OR14J1Q9UGF5 321 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 INSIG2Q9Y5U4 225 aa12.82□□□□□ -0.36
LINC01220-201ENST00000558575 LOC105371242A0A075B767 164 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 KIR2DS1A0A191URI9 304 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 TMEM82A0PJX8 343 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 MEGF11A6BM72 1044 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 NDUFB3O43676 98 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 ZNF737O75373 536 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 JUNBP17275 347 aaPredicted RBP12.81□□□□□ -0.36
LINC01220-201ENST00000558575 NPY4RP50391 375 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 IL13RA1P78552 427 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 PAX8Q06710 450 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 ZNF146Q15072 292 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 FAHD2BQ6P2I3 314 aaPredicted RBP12.81□□□□□ -0.36
LINC01220-201ENST00000558575 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 RAB40AQ8WXH6 277 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 FAHD2AQ96GK7 314 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 OPN4Q9UHM6 478 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 ING4Q9UNL4 249 aa12.81□□□□□ -0.36
LINC01220-201ENST00000558575 IGHV2-70DA0A0C4DH43 119 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 A0A1W2PP11 408 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 SRP14P37108 136 aaKnown RBP12.8□□□□□ -0.36
LINC01220-201ENST00000558575 SNU13P55769 128 aaKnown RBP12.8□□□□□ -0.36
LINC01220-201ENST00000558575 FGF12P61328 243 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 COL10A1Q03692 680 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 C1orf100Q5SVJ3 147 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 Q6P435 159 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 JAGN1Q8N5M9 183 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 CPNE2Q96FN4 548 aaPredicted RBP12.8□□□□□ -0.36
LINC01220-201ENST00000558575 FAM192AQ9GZU8 254 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 OR51E2Q9H255 320 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 ELL3Q9HB65 397 aaPredicted RBP12.8□□□□□ -0.36
LINC01220-201ENST00000558575 RHOFQ9HBH0 211 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 IL36GQ9NZH8 169 aa12.8□□□□□ -0.36
LINC01220-201ENST00000558575 SLC25A10Q9UBX3 287 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms