RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 PPIAL4GP0DN37 164 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 EPHA1P21709 976 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 DUSP1P28562 367 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ZNF93P35789 620 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-205ENST00000558428 COL10A1Q03692 680 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 MLLT11Q13015 90 aaPredicted RBP10.21□□□□□ -0.77
SMAD3-205ENST00000558428 SCGB2A2Q13296 93 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 TPBGQ13641 420 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 INSL4Q14641 139 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ACSM3Q53FZ2 586 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 METTL11BQ5VVY1 283 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ZNF367Q7RTV3 350 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ASCC1Q8N9N2 400 aaKnown RBP10.21□□□□□ -0.77
SMAD3-205ENST00000558428 PXT1Q8NFP0 134 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 MGLLQ99685 303 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 PCGF1Q9BSM1 259 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 CNTD2Q9H8S5 307 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 RHOFQ9HBH0 211 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 HMG20AQ9NP66 347 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ACOT13Q9NPJ3 140 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 ONECUT1Q9UBC0 465 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 GLS2Q9UI32 602 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 FOXJ3Q9UPW0 622 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 GSTK1Q9Y2Q3 226 aa10.21□□□□□ -0.77
SMAD3-205ENST00000558428 DSCAML1Q8TD84 2053 aa10.21□□□□□ -0.78
SMAD3-205ENST00000558428 TRAV40A0A0B4J280 105 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 A0A1W2PQ09 198 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 MRPS14O60783 128 aaKnown RBP10.2□□□□□ -0.78
SMAD3-205ENST00000558428 TOX4O94842 621 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 TK1P04183 234 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 MAS1P04201 325 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 CPEP16870 476 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 PTGFRP43088 359 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 OR3A4PP47883 348 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 ARF6P62330 175 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF146Q15072 292 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 KIAA2026Q5HYC2 2103 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-205ENST00000558428 SPIN3Q5JUX0 258 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 UNQ9370/PRO34162Q6UXP9 181 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 SVOPQ8N4V2 548 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 LY6G5BQ8NDX9 201 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 C8orf46Q8TAG6 207 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 TMEM203Q969S6 136 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 UPRTQ96BW1 309 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 WDFY2Q96P53 400 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 FAM234AQ9H0X4 552 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 ING4Q9UNL4 249 aa10.2□□□□□ -0.78
SMAD3-205ENST00000558428 IGHV3OR16-10A0A075B7F0 116 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 K7N7A8 449 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 SH2D1BO14796 132 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 MMP9P14780 707 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 MTNR1BP49286 362 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 BMXP51813 675 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 RPS25P62851 125 aaKnown RBP10.19□□□□□ -0.78
SMAD3-205ENST00000558428 EMX1Q04741 257 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-205ENST00000558428 RSU1Q15404 277 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 FAM27D1Q5T7N8 215 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 CEACAM19Q7Z692 300 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 PHC2Q8IXK0 858 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 CMTM4Q8IZR5 234 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 FAM185AQ8N0U4 392 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 JAGN1Q8N5M9 183 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 OR10K1Q8NGX5 313 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 SNX22Q96L94 193 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 DMRTB1Q96MA1 342 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 S100A13Q99584 98 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 SIRPDQ9H106 197 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 METTL9Q9H1A3 318 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 OCEL1Q9H607 264 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 SEBOXQ9HB31 216 aaPredicted RBP10.19□□□□□ -0.78
SMAD3-205ENST00000558428 TCF7L1Q9HCS4 588 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 EXOSC4Q9NPD3 245 aaKnown RBP10.19□□□□□ -0.78
SMAD3-205ENST00000558428 NUP50Q9UKX7 468 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 LRRC42Q9Y546 428 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 KPTNQ9Y664 436 aa10.19□□□□□ -0.78
SMAD3-205ENST00000558428 ATRQ13535 2644 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 TMEM82A0PJX8 343 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 SIRPB1O00241 398 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF737O75373 536 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 SC5DO75845 299 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 RGS9O75916 674 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-205ENST00000558428 CDRT1O95170 752 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 HTR3BO95264 441 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 OR2H2O95918 312 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 IGHV4-38-2P0DP08 117 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF44P15621 663 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 GABRR1P24046 479 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 PSMA1P25786 263 aaKnown RBP10.18□□□□□ -0.78
SMAD3-205ENST00000558428 RPL31P62899 125 aaKnown RBP10.18□□□□□ -0.78
SMAD3-205ENST00000558428 SCN1BQ07699 218 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 TRAM1Q15629 374 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 HSD17B12Q53GQ0 312 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 GPR157Q5UAW9 335 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 ELP2Q6IA86 826 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 GDPD3Q7L5L3 318 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 SPARTQ8N0X7 666 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 OR8H2Q8N162 312 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 BPIFB2Q8N4F0 458 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms