RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 B4E171 279 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 IGLV3-25P01717 112 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 IGHEP01854 428 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 HBZP02008 142 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 CD1CP29017 333 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 CD226Q15762 336 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 FBXL14Q8N1E6 418 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 ADTRPQ96IZ2 230 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 SAP30LQ9HAJ7 183 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 FGF17O60258 216 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 HOXA5P20719 270 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 ARR3P36575 388 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 SUMO3P55854 103 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 PARM1Q6UWI2 310 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR11G2Q8NGC1 345 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR11H4Q8NGC9 324 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 CNRIP1Q96F85 164 aaPredicted RBP10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 TRBV5-3A0A0A0MS03 114 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 IGSF23A1L1A6 192 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR5B21A6NL26 309 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 SIRPB1O00241 398 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 HLA-DQA1P01909 254 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 SMIM17P0DL12 118 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 SRSF9Q13242 221 aaKnown RBP eCLIP10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 HERPUD1Q15011 391 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 C9orf135Q5VTT2 229 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 MRGPREQ86SM8 312 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 Q8IYB0 196 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 AQP10Q96PS8 301 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 TUBA4BQ9H853 241 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 HES4Q9HCC6 221 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 ANXA10Q9UJ72 324 aa10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 PTRH2Q9Y3E5 179 aaKnown RBP10.48□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR2W5A6NFC9 320 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 PDCD6O75340 191 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR2A4O95047 310 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 VSIG10L2P0DP72 767 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 HIST1H1EP10412 219 aaKnown RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ARG2P78540 354 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 NTHL1P78549 312 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ZNF707Q96C28 371 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 MUCL1Q96DR8 90 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR2A7Q96R45 310 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 A0A0A6YYD5 115 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 TGIF2-C20orf24A0A0A6YYL0 155 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 CNIH1O95406 144 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 CRYABP02511 175 aaKnown RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 SOD3P08294 240 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 GLIPR1P48060 266 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ADPRHP54922 357 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ACSM6Q6P461 480 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 GVQW1Q8N7I0 195 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 NUDT16L1Q9BRJ7 211 aaKnown RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 CNTD2Q9H8S5 307 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ARID1BQ8NFD5 2236 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 DNASE2O00115 360 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 GRPP07492 148 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 DPTQ07507 201 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ZNF816Q0VGE8 651 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 RUNX2Q13950 521 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 DCAF12L2Q5VW00 463 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 SLC25A33Q9BSK2 321 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 PLAC1Q9HBJ0 212 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 MMP25Q9NPA2 562 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 FAM206AQ9NX38 181 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 OBP2AQ9NY56 170 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 LAMB2P55268 1798 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 H3BVH4 76 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 CHST1O43916 411 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 PAGE4O60829 102 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 CYBAP13498 195 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 HIST1H1BP16401 226 aaKnown RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 FAHP16930 419 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 SAMD13Q5VXD3 122 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR5R1Q8NH85 324 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 MRGPRX4Q96LA9 322 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 ALKBH7Q9BT30 221 aaPredicted RBP10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 VCX2Q9H322 139 aa10.47□□□□□ -0.73
CSPG4P12-201ENST00000558282 DNAJC25-GNG10A0A024R161 153 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 TMEM202A6NGA9 273 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 LRRC30A6NM36 301 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 EPPINO95925 133 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 ORM1P02763 201 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 LPAR6P43657 344 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 COMPP49747 757 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 EMDP50402 254 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR8B8Q15620 311 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 MRPL54Q6P161 138 aaKnown RBP10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 C11orf40Q8WZ69 217 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 ZNF775Q96BV0 537 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 KTI12Q96EK9 354 aaPredicted RBP10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 NRAPQ86VF7 1730 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 MARF1Q9Y4F3 1742 aaKnown RBP10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 TRBV9A0A0B4J1U6 114 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 MELTFP08582 738 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 ZNF117Q03924 483 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 SHISA6Q6ZSJ9 500 aa10.46□□□□□ -0.73
CSPG4P12-201ENST00000558282 OR10V1Q8NGI7 309 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms