RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 DEFB108BQ8NET1 73 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 OR5D13Q8NGL4 314 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 RAB2BQ8WUD1 216 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 IFT22Q9H7X7 185 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 ELL3Q9HB65 397 aaPredicted RBP11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 SPACA1Q9HBV2 294 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 CLN8Q9UBY8 286 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 ING4Q9UNL4 249 aa11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 AK6Q9Y3D8 172 aaKnown RBP11.78□□□□□ -0.52
SUPT16H-208ENST00000557652 IGKV1D-17A0A075B6S4 117 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 RFPL4AA6NLU0 287 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 IFITM5A6NNB3 132 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 RFPL4AL1F8VTS6 287 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 WNT9BO14905 357 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 TMPRSS2O15393 492 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 NDUFB3O43676 98 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 SFTPBP07988 381 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 INHBBP09529 407 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 PRKACAP17612 351 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 LMO1P25800 156 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 PRDX2P32119 198 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 NPBWR2P48146 333 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 KCNJ3P48549 501 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 PITPNBP48739 271 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 TMBIM6P55061 237 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 RAB11BQ15907 218 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 CYB5R2Q6BCY4 276 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 BIVMQ86UB2 503 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 OSR2Q8N2R0 312 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 LINC01356Q8N9X3 169 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 OR4D6Q8NGJ1 314 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 PTX4Q96A99 478 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 CENPOQ9BU64 300 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 SSBP3Q9BWW4 388 aaPredicted RBP11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 RBFOX1Q9NWB1 397 aaKnown RBP11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 STEAP1Q9UHE8 339 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 AKAP9Q99996 3911 aa11.77□□□□□ -0.53
SUPT16H-208ENST00000557652 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 ARHGAP32A7KAX9 2087 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 TRAV20A0A0B4J274 112 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 FUOMA2VDF0 154 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 NOL3O60936 208 aaKnown RBP11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF205O95201 554 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 HTR3BO95264 441 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 HAND1O96004 215 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 GYPAP02724 150 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 GLAP06280 429 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 ARSBP15848 533 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 SDC2P34741 201 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 GNB2P62879 340 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 SLC22A6Q4U2R8 563 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 KIAA2026Q5HYC2 2103 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 C1QL2Q7Z5L3 287 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 SNX22Q96L94 193 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 C1orf147Q96MC9 270 aaPredicted RBP11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF488Q96MN9 340 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 HIVEP2P31629 2446 aa11.76□□□□□ -0.53
SUPT16H-208ENST00000557652 IGHV3OR15-7A0A075B7D8 119 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 TRBV23-1A0A0A0MS06 115 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 SHISA3A0PJX4 238 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 F8VVB4 439 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 F8VWA3 439 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 CDRT1O95170 752 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 CSN2P05814 226 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 LIPFP07098 398 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 MSMBP08118 114 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 SERPINA2P20848 420 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 GABRA2P47869 451 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 DVL1P1P54792 670 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 RBM11P57052 281 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 PAX5Q02548 391 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 DYNC1I2Q13409 638 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF841Q6ZN19 808 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 SLC16A12Q6ZSM3 486 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 USP43Q70EL4 1123 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 RNF144BQ7Z419 303 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 TEX29Q8N6K0 151 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 SLC25A28Q96A46 364 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 FAM3DQ96BQ1 224 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 KCTD12Q96CX2 325 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 GAFA1Q96PS6 74 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 GFI1Q99684 422 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 URM1Q9BTM9 101 aaKnown RBP11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 NCOR1P1Q9H4R4 102 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 NARFLQ9H6Q4 476 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 NDUFA13Q9P0J0 144 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 LPAR3Q9UBY5 353 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 OR5V1Q9UGF6 321 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 ST3GAL6Q9Y274 331 aa11.75□□□□□ -0.53
SUPT16H-208ENST00000557652 TMEM14DPA8MWL7 114 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 K7N7A8 449 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 ZNF701M0R085 212 aaPredicted RBP11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 CD5LO43866 347 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 SCGNO76038 276 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 IGHV4-31P0DP07 118 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 CALCBP10092 127 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 MGMTP16455 207 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 RAB6AP20340 208 aa11.74□□□□□ -0.53
SUPT16H-208ENST00000557652 GMFBP60983 142 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms