RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 DAPK2Q9UIK4 370 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 HIVEP1P15822 2718 aa12.74□□□□□ -0.37
NEDD1-213ENST00000557644 AIPO00170 330 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 KNG1P01042 644 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 VSIG8P0DPA2 414 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 PRDX2P32119 198 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 LOXL1Q08397 574 aaPredicted RBP12.73□□□□□ -0.37
NEDD1-213ENST00000557644 KCNJ8Q15842 424 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 SFXN4Q6P4A7 337 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 SPNS3Q6ZMD2 512 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 Q8NFD4 153 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 GAFA1Q96PS6 74 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 PATZ1Q9HBE1 687 aaKnown RBP12.73□□□□□ -0.37
NEDD1-213ENST00000557644 CRTAPO75718 401 aaPredicted RBP12.73□□□□□ -0.37
NEDD1-213ENST00000557644 WNT2P09544 360 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 ARSBP15848 533 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 PLA2G7Q13093 441 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 UNC119Q13432 240 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF146Q15072 292 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 OSR2Q8N2R0 312 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 ZNRF1Q8ND25 227 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 FAM3DQ96BQ1 224 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 LIN7BQ9HAP6 207 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 MAB21L2Q9Y586 359 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 ABCA2Q9BZC7 2435 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 CSPG4Q6UVK1 2322 aa12.73□□□□□ -0.37
NEDD1-213ENST00000557644 FAM157AC9JC47 383 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF780AO75290 641 aaPredicted RBP12.72□□□□□ -0.37
NEDD1-213ENST00000557644 TMBIM6P55061 237 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 QRFPP83859 136 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 IKZF1Q13422 519 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 SPCS2Q15005 226 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 C2orf76Q3KRA6 126 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 ATPAF1Q5TC12 328 aaPredicted RBP12.72□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 RAB2BQ8WUD1 216 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 ST3GAL6Q9Y274 331 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 CR1P17927 2039 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 MALRD1Q5VYJ5 2156 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 GEMIN2O14893 280 aaKnown RBP12.72□□□□□ -0.37
NEDD1-213ENST00000557644 NDUFA2O43678 99 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 HAND1O96004 215 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 IL1AP01583 271 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 GTF2F2P13984 249 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 MGMTP16455 207 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 CFPP27918 469 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 SCN1BQ07699 218 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 ZNF841Q6ZN19 808 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 OR51T1Q8NGJ9 327 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 RBM38Q9H0Z9 239 aaKnown RBP12.72□□□□□ -0.37
NEDD1-213ENST00000557644 DCSTAMPQ9H295 470 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 GHRLQ9UBU3 117 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 MIOXQ9UGB7 285 aa12.72□□□□□ -0.37
NEDD1-213ENST00000557644 F5H0A9 414 aaPredicted RBP12.71□□□□□ -0.37
NEDD1-213ENST00000557644 H3BMQ9 156 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
NEDD1-213ENST00000557644 BPNT1O95861 308 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 MPIG6BO95866 241 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 PAHP00439 452 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.37
NEDD1-213ENST00000557644 COL10A1Q03692 680 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 GPR176Q14439 515 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 SPIN3Q5JUX0 258 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 IDNKQ5T6J7 187 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 FIP1L1Q6UN15 594 aaKnown RBP12.71□□□□□ -0.37
NEDD1-213ENST00000557644 BARHL1Q9BZE3 327 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 SELENOIQ9C0D9 397 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 LPAR2Q9HBW0 351 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 KAAG1Q9UBP8 84 aa12.71□□□□□ -0.37
NEDD1-213ENST00000557644 CCDC160A6NGH7 325 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM14DPA8MWL7 114 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 OR2H2O95918 312 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 UBBP0CG47 229 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 TAF9Q16594 264 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 Q6P435 159 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 OR8B3Q8NGG8 313 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 SLC25A46Q96AG3 418 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 NEIL1Q96FI4 390 aaPredicted RBP12.71□□□□□ -0.38
NEDD1-213ENST00000557644 SDSLQ96GA7 329 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 CYYR1Q96J86 154 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 COX4I2Q96KJ9 171 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 OR8B2Q96RD0 313 aa12.71□□□□□ -0.38
NEDD1-213ENST00000557644 DPPA5A6NC42 116 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 NKX6-3A6NJ46 265 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 SIRPB1O00241 398 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 DVL1O14640 695 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 SIGLEC5O15389 551 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 PSPNO60542 156 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 SNRPBP14678 240 aaKnown RBP12.7□□□□□ -0.38
NEDD1-213ENST00000557644 ZFP36P26651 326 aaKnown RBP12.7□□□□□ -0.38
NEDD1-213ENST00000557644 PITPNBP48739 271 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 BMXP51813 675 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 IL13RA1P78552 427 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 USP43Q70EL4 1123 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 NLRC3Q7RTR2 1065 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 SLC36A1Q7Z2H8 476 aa12.7□□□□□ -0.38
NEDD1-213ENST00000557644 RAB39BQ96DA2 213 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms