RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 BDH1Q02338 343 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 PRKCDQ05655 676 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CKAP4Q07065 602 aaKnown RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF273Q14593 569 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SNCBQ16143 134 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SNAPC1Q16533 368 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 MEP1BQ16820 701 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CXorf66Q5JRM2 361 aaPredicted RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RNLSQ5VYX0 342 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 LGALS9CQ6DKI2 356 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 NANOGP8Q6NSW7 305 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ACSM6Q6P461 480 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TMPRSS11FQ6ZWK6 438 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC16A9Q7RTY1 509 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ADCK1Q86TW2 530 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ANKRD13BQ86YJ7 626 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SPARTQ8N0X7 666 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 STPG2Q8N412 459 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CD177Q8N6Q3 437 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CSNK2A3Q8NEV1 391 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR11H1Q8NG94 326 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR4P4Q8NGL7 312 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR6Q1Q8NGQ2 317 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 MPLKIPQ8TAP9 179 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 NDNFQ8TB73 568 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC26A7Q8TE54 656 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 C4orf3Q8WVX3 66 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR5P3Q8WZ94 311 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RPL3LQ92901 407 aaKnown RBP3.62□□□□□ -1.83
SCFD1-223ENST00000557076 EME1Q96AY2 570 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 CREB3L1Q96BA8 519 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SGK3Q96BR1 496 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TAMM41Q96BW9 452 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RNF170Q96K19 258 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 NABP2Q9BQ15 211 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ST6GALNAC5Q9BVH7 336 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RTL8AQ9BWD3 113 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM120AQ9BXJ8 343 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SLC25A32Q9H2D1 315 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 HIPK2Q9H2X6 1198 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 GHITMQ9H3K2 345 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 IKZF5Q9H5V7 419 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 ABCB9Q9NP78 766 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 DNAJB9Q9UBS3 223 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 B9D1Q9UPM9 204 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 SH3GLB1Q9Y371 365 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 RHBDD3Q9Y3P4 386 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 MPC1Q9Y5U8 109 aa3.62□□□□□ -1.83
SCFD1-223ENST00000557076 OR6C68A6NDL8 312 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 HMX3A6NHT5 357 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 SMIM23A6NLE4 172 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 EFCAB9A8MZ26 197 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 LEUTXA8MZ59 168 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OOSP1A8MZH6 123 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 LY6LH3BQJ8 138 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 K7N7A8 449 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 IMPA2O14732 288 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 FGF16O43320 207 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 CST4P01036 141 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 TK1P04183 234 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ANOS1P23352 680 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 POU3F4P49335 361 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 MRPL19P49406 292 aaKnown RBP3.61□□□□□ -1.83
SCFD1-223ENST00000557076 SLC7A2P52569 658 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ESRRGP62508 458 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ST3GAL3Q11203 375 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 STX3Q13277 289 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 GPR50Q13585 617 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 KIAA0141Q14154 515 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-223ENST00000557076 CCDC144NLQ6NUI1 221 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 TMEM65Q6PI78 240 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 DNM1P34Q6PK57 102 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 SMARCD3Q6STE5 483 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 DLEU7Q6UYE1 221 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 DPY19L2P2Q6ZN68 376 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ACP7Q6ZNF0 438 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 PTCHD4Q6ZW05 846 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 CCDC80Q76M96 950 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 KRT74Q7RTS7 529 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 RTN4RL2Q86UN3 420 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 LINC00346Q8IVM7 164 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 FOXRED2Q8IWF2 684 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 SGPP2Q8IWX5 399 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 IFT20Q8IY31 132 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ZDHHC23Q8IYP9 409 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OR6V1Q8N148 313 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 FTMTQ8N4E7 242 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OR4C15Q8NGM1 316 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OR9I1Q8NGQ6 314 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OR1N2Q8NGR9 330 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 ZNF570Q96NI8 536 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 TSSK2Q96PF2 358 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 GPX7Q96SL4 187 aaPredicted RBP3.61□□□□□ -1.83
SCFD1-223ENST00000557076 NRIP2Q9BQI9 281 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 CLEC7AQ9BXN2 247 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 NDEL1Q9GZM8 345 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 OR51I2Q9H344 312 aa3.61□□□□□ -1.83
SCFD1-223ENST00000557076 PPP1R3EQ9H7J1 279 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms