RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 ZNF442Q9H7R0 627 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 RAB18Q9NP72 206 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 NECAP2Q9NVZ3 263 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 OR5AC2Q9NZP5 309 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 EDARQ9UNE0 448 aa8.68□□□□□ -1.02
TMEM260-211ENST00000556648 A0A0B4J2A0 478 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 A0A0D9SG52 128 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 hCG_1807616A0A1W2PRN6 198 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 OR2F2O95006 317 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 CTSDP07339 412 aaPredicted RBP8.67□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF14P17017 642 aaPredicted RBP8.67□□□□□ -1.02
TMEM260-211ENST00000556648 FUT3P21217 361 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 IL32P24001 234 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 PSMB6P28072 239 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 FCGR2CP31995 323 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 UBA52P62987 128 aaKnown RBP8.67□□□□□ -1.02
TMEM260-211ENST00000556648 OR2F1Q13607 317 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF345Q14585 488 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 RGS7BPQ6MZT1 257 aaPredicted RBP8.67□□□□□ -1.02
TMEM260-211ENST00000556648 HAGHLQ6PII5 290 aaPredicted RBP8.67□□□□□ -1.02
TMEM260-211ENST00000556648 IGFL2Q6UWQ7 119 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 C9orf106Q8NAJ2 232 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 Q8NFD4 153 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 OR5P3Q8WZ94 311 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 NMES1Q9C002 83 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 GP6Q9HCN6 339 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 C12orf4Q9NQ89 552 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 SHPKQ9UHJ6 478 aa8.67□□□□□ -1.02
TMEM260-211ENST00000556648 KANTRA0A1W2PQU2 76 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 TUBAL3A6NHL2 446 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 MSGN1A6NI15 193 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 CRYM-AS1A6NIL9 109 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 CDK2AP1O14519 115 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 SNAPC5O75971 98 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 IFNA2P01563 188 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 CA6P23280 308 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 CALCRP30988 508 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 IDH3GP51553 393 aaPredicted RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 FGF12P61328 243 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 RBM39Q14498 530 aaKnown RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 SP6Q3SY56 376 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 PHLDA2Q53GA4 152 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 IGSF11Q5DX21 431 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 NSUN5P2Q63ZY6 315 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 VWA1Q6PCB0 445 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ACOT7LQ6ZUV0 252 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 C17orf78Q8N4C9 275 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 OR11L1Q8NGX0 322 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 NANOS1Q8WY41 292 aaKnown RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 METTL8Q9H825 291 aaKnown RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF286AQ9HBT8 521 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 DECR2Q9NUI1 292 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 IGHV3-64DA0A0J9YX35 117 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 TEX13DA0A0J9YY54 714 aaPredicted RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 LRP3O75074 770 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 RHBDL1O75783 438 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 SCO1O75880 301 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF728P0DKX0 622 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 GLI4P10075 376 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 AADACP22760 399 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 NOVA1P51513 510 aaKnown RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 PIGPP57054 158 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 RAB32Q13637 225 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 GUSBP1Q15486 140 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ALKBH6Q3KRA9 238 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ELP2Q6IA86 826 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 DHRS11Q6UWP2 260 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 UNQ6126/PRO20091Q6UXV3 157 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 WDR86Q86TI4 376 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 CNEP1R1Q8N9A8 125 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 OR1S1Q8NH92 325 aa8.66□□□□□ -1.02
TMEM260-211ENST00000556648 MRPL24Q96A35 216 aaKnown RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ZNF471Q9BX82 626 aaPredicted RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 EP300Q09472 2414 aaPredicted RBP8.66□□□□□ -1.02
TMEM260-211ENST00000556648 ESPL1Q14674 2120 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 DMXL1Q9Y485 3027 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 TRBV6-7A0A0A0MS04 114 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 MFSD2BA6NFX1 497 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 ANKRD30BLA7E2S9 258 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 TM4SF5O14894 197 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 SMPD2O60906 423 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 PDGFAP04085 211 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 PRKACAP17612 351 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 S100A10P60903 97 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 FOXF2Q12947 444 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 IL15RAQ13261 267 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 TBC1D28Q2M2D7 210 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 SAXO1Q8IYX7 474 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 OR5A2Q8NGI9 324 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 OR5L1Q8NGL2 311 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 C2orf50Q96LR7 162 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 TAAR6Q96RI8 345 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 SDHAF2Q9NX18 166 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
TMEM260-211ENST00000556648 LOC400499M0QZD8 3231 aa8.65□□□□□ -1.03
TMEM260-211ENST00000556648 TRAV17A0A0B4J275 112 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 TRAPPC2LH3BP13 241 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 AQP7O14520 342 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 AGFG2O95081 481 aa8.64□□□□□ -1.03
TMEM260-211ENST00000556648 OR5AC1P0C628 307 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms