RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 ZNF28P17035 718 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TFPI2P48307 235 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CLDN18P56856 261 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 IL13RA1P78552 427 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RBM39Q14498 530 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 EMC4Q5J8M3 183 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 STPG1Q5TH74 334 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PEAR1Q5VY43 1037 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 MBNL2Q5VZF2 373 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OTPQ5XKR4 325 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 HLA-DQA1Q5Y7H0 255 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RPL22L1Q6P5R6 122 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 UNQ9370/PRO34162Q6UXP9 181 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR8I2Q8N0Y5 310 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR51D1Q8NGF3 324 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR52B4Q8NGK2 314 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR2T4Q8NH00 348 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF519Q8TB69 540 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 HPSE2Q8WWQ2 592 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 KCTD12Q96CX2 325 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR11A1Q9GZK7 315 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CDCP1Q9H5V8 836 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TNFSF18Q9UNG2 199 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 GPR179Q6PRD1 2367 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 NCKAP5O14513 1909 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TRAV36DV7A0A075B6V5 113 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1W2PPE3 182 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TVP23AA6NH52 213 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 C9J4A7 227 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 AGPAT2O15120 278 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 WDR1O75083 606 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CEACAM4O75871 244 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 EPXP11678 715 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 GLP1RP43220 463 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PIGPP57054 158 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 EIF5AP63241 154 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 INSM1Q01101 510 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 NR0B2Q15466 257 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ACKR1Q16570 336 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 GUCA2BQ16661 112 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 LTC4SQ16873 150 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ANKRD55Q3KP44 614 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SPATA46Q5T0L3 261 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM123Q8N131 208 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 GABRG1Q8N1C3 465 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 C15orf54Q8N8G6 183 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SAMD12Q8N8I0 201 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 HAVCR2Q8TDQ0 301 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 MCHR2Q969V1 340 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OCIAD1Q9NX40 245 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SMPXQ9UHP9 88 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ING1Q9UK53 422 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RAB22AQ9UL26 194 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 NCOA6Q14686 2063 aaPredicted RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TMED7-TICAM2A0A0A6YYA0 188 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 A0A1B0GTH9 108 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 hCG_38984A0A1B0GV85 526 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ZNF814B7Z6K7 855 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 C11orf98E9PRG8 122 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SLC19A2O60779 497 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ALOX12BO75342 701 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DXOO77932 396 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RGS11O94810 467 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DKK1O94907 266 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 NUDT14O95848 222 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 WNT11O96014 354 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 NMBP08949 121 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CELA3AP09093 270 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 HLA-DOBP13765 273 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SELEP16581 610 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ADRA2CP18825 462 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PGCP20142 388 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 BTCP35070 178 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PTGDSP41222 190 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RPS10P46783 165 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PDLIM4P50479 330 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TCL1AP56279 114 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ERVFC1-1P60608 527 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 RAB32Q13637 225 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 PCK2Q16822 640 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 TMEM41BQ5BJD5 291 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 EIF5AL1Q6IS14 154 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CCDC144NLQ6NUI1 221 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 MRPL14Q6P1L8 145 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DPY19L4Q7Z388 723 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 C1orf210Q8IVY1 113 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 FAM219AQ8IW50 185 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 BPIFB2Q8N4F0 458 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 BOLLQ8N9W6 283 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 OR4P4Q8NGL7 312 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 CFHR4Q92496 578 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 UPRTQ96BW1 309 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 C8orf44Q96CB5 159 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 ZC3HAV1LQ96H79 300 aaKnown RBP4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DERL3Q96Q80 235 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 SLC25A32Q9H2D1 315 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 DPAGT1Q9H3H5 408 aa4.47□□□□□ -1.69
TMEM260-210ENST00000556422 FRRS1LQ9P0K9 344 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms