RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 LSAMPQ13449 338 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 IL13RA2Q14627 380 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 TAF9Q16594 264 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 MICBQ29980 383 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 MPV17LQ2QL34 196 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 TMEM69Q5SWH9 247 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 PEG10Q86TG7 708 aaKnown RBP9.28□□□□□ -0.92
TMEM260-208ENST00000555905 CCDC190Q86UF4 302 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 FAM89BQ8N5H3 189 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 GCSAMQ8N6F7 178 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 CHST4Q8NCG5 386 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 OR4M1Q8NGD0 313 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 IGFBPL1Q8WX77 278 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 NUDT16L1Q9BRJ7 211 aaKnown RBP9.28□□□□□ -0.92
TMEM260-208ENST00000555905 WDR13Q9H1Z4 485 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 RABL2AQ9UBK7 228 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-208ENST00000555905 RABL2BQ9UNT1 228 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 CACNG2Q9Y698 323 aa9.28□□□□□ -0.92
TMEM260-208ENST00000555905 PPIAL4EA0A075B759 164 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 A0A0A6YYD4 124 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 TRAV38-1A0A0B4J264 116 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 CLDN25C9JDP6 229 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 PPIAL4DF5H284 164 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 GEMIN2O14893 280 aaKnown RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 DEGS1O15121 323 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 OR7C1O76099 320 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 PPIAL4FP0DN26 164 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 MUC1P15941 1255 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 COL8A2P25067 703 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 BLVRBP30043 206 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 CD80P33681 288 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 NR4A2P43354 598 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 ZNF45Q02386 682 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 SCN1BQ07699 218 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 IL18Q14116 193 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 ZNF146Q15072 292 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 KCNJ8Q15842 424 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 METAP1DQ6UB28 335 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 FAM131AQ6UXB0 335 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 TGIF2LYQ8IUE0 185 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 OR10R2Q8NGX6 335 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 C15orf40Q8WUR7 153 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 YIPF5Q969M3 257 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 RAB3CQ96E17 227 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 TIMD4Q96H15 378 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 NEDD4LQ96PU5 975 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 NICN1Q9BSH3 213 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 BARX1Q9HBU1 254 aaPredicted RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 SPACA1Q9HBV2 294 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 NLKQ9UBE8 527 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 IL36RNQ9UBH0 155 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 OR14J1Q9UGF5 321 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 MRPS7Q9Y2R9 242 aaKnown RBP9.27□□□□□ -0.93
TMEM260-208ENST00000555905 WIPI2Q9Y4P8 454 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 PPIAL4AQ9Y536 164 aa9.27□□□□□ -0.93
TMEM260-208ENST00000555905 TRAV18A0A075B6X5 111 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 IGHV3OR15-7A0A075B7D8 119 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 OOEPA6NGQ2 149 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 RFPL4AA6NLU0 287 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 OR2AT4A6NND4 320 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 RFPL4AL1F8VTS6 287 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 LYNX1G3V0Z9 82 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 RAB27BO00194 218 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 LGALS8O00214 317 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 SOCS1O15524 211 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 PDCD6O75340 191 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 TPPPO94811 219 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 HAND1O96004 215 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 LYNX1P0DP58 116 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 FUT3P21217 361 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 PTBP1P26599 531 aaKnown RBP eCLIP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 DUSP1P28562 367 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ETV6P41212 452 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 MNDAP41218 407 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 PITPNAQ00169 270 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ZNF846Q147U1 533 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ARL6IP1Q15041 203 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 MOGAT2Q3SYC2 334 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 NKAPLQ5M9Q1 402 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 FAM201AQ5SY85 155 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ATAD3CQ5T2N8 411 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 HIST2H2BCQ6DN03 193 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 SFRP4Q6FHJ7 346 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 Q6ZTK2 550 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 BIVMQ86UB2 503 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 IZUMO1Q8IYV9 350 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 DTX3Q8N9I9 347 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 SEH1LQ96EE3 360 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 WDR12Q9GZL7 423 aaKnown RBP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 LIME1Q9H400 295 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 IFT22Q9H7X7 185 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 CHODLQ9H9P2 273 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 MYOZ1Q9NP98 299 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 AKIP1Q9NQ31 210 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 ZNF701Q9NV72 531 aaPredicted RBP9.26□□□□□ -0.93
TMEM260-208ENST00000555905 PLEKHJ1Q9NW61 149 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 DCAF16Q9NXF7 216 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 PLEKHA6Q9Y2H5 1048 aa9.26□□□□□ -0.93
TMEM260-208ENST00000555905 NKX6-3A6NJ46 265 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms