RNA–Protein interactions for RNA: ENST00000555550.1

SCFD1-216, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-216ENST00000555550 OTUD6AQ7L8S5 288 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 FAM19A1Q7Z5A9 133 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 DAW1Q8N136 415 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 ZNF555Q8NEP9 628 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 OR10Z1Q8NGY1 313 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 UBE2WQ96B02 151 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 DEFB129Q9H1M3 183 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 ZC4H2Q9NQZ6 224 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 U3KQK5 164 aa0.97□□□□□ -2.25
SCFD1-216ENST00000555550 C19orf71A6NCJ1 209 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 A6NED7 52 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF860A6NHJ4 632 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 HACD1B0YJ81 288 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 F5H5P2 479 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 LY6LH3BQJ8 138 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 J3QT63 122 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 K7EPK0 472 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF701M0R085 212 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-216ENST00000555550 VAPBO95292 243 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 RALBP11234 206 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF22P17026 224 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-216ENST00000555550 HOXB8P17481 243 aaPredicted RBP0.96□□□□□ -2.26
SCFD1-216ENST00000555550 MAGEA6P43360 314 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PSG4Q00888 419 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 TMEM241Q24JQ0 296 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 C5orf64Q2M2E5 130 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 BEX5Q5H9J7 111 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PLCXD3Q63HM9 321 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 NOXRED1Q6NXP6 359 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 CLEC18BQ6UXF7 455 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 TCF23Q7RTU1 214 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PRNTQ86SH4 94 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 LINC00523Q86TU6 105 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 KIF2BQ8N4N8 673 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PROKR2Q8NFJ6 384 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 OR2V1Q8NHB1 315 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 GPR119Q8TDV5 335 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 CA5BP1Q8WTZ4 195 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 CPB2Q96IY4 423 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 C9orf72Q96LT7 481 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 ZMAT5Q9UDW3 170 aaKnown RBP0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PRO0628Q9UI54 55 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 ORC6Q9Y5N6 252 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 PLXNA3P51805 1871 aa0.96□□□□□ -2.26
SCFD1-216ENST00000555550 IGHV3-43A0A0B4J1X8 118 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 A0A1W2PPV4 95 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 IVLP07476 585 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 PRKACAP17612 351 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 MSR1P21757 451 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 CCT6AP40227 531 aaKnown RBP0.95□□□□□ -2.26
SCFD1-216ENST00000555550 P2RY2P41231 377 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 CSKP41240 450 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 MAGEA1P43355 309 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 PAFAH1B2P68402 229 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 LCN2P80188 198 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 FOXF1Q12946 379 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 ZBTB6Q15916 424 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 TNXAQ16473 311 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 TMEM176BQ3YBM2 270 aaPredicted RBP0.95□□□□□ -2.26
SCFD1-216ENST00000555550 MICU2Q8IYU8 434 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 DEFB119Q8N690 84 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 LINC00337Q8N6G1 96 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 SMIM8Q96KF7 97 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 IL22Q9GZX6 179 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 NAA50Q9GZZ1 169 aaKnown RBP0.95□□□□□ -2.26
SCFD1-216ENST00000555550 OR51B5Q9H339 312 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 RGCCQ9H4X1 137 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 STMN3Q9NZ72 180 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 FADS3Q9Y5Q0 445 aa0.95□□□□□ -2.26
SCFD1-216ENST00000555550 PLXNB3Q9ULL4 1909 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 DHRS3O75911 302 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 PAX6P26367 422 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 IVDP26440 423 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 CARD18P57730 90 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 YWHAEP62258 255 aaKnown RBP0.94□□□□□ -2.26
SCFD1-216ENST00000555550 DNAJC3Q13217 504 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF773Q6PK81 442 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 EPGNQ6UW88 154 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 CLEC19AQ6UXS0 136 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 CYP4Z2PQ8N1L4 340 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 OR4A15Q8NGL6 344 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 OR5C1Q8NGR4 320 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 OR2K2Q8NGT1 345 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 MFSD8Q8NHS3 518 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 OR8D1Q8WZ84 308 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 TFGQ92734 400 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-216ENST00000555550 MAP1LC3CQ9BXW4 147 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 BLZF1Q9H2G9 400 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 KLF13Q9Y2Y9 288 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-216ENST00000555550 INSIG2Q9Y5U4 225 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 ZNF706Q9Y5V0 76 aaPredicted RBP0.94□□□□□ -2.26
SCFD1-216ENST00000555550 SBNO1A3KN83 1393 aa0.94□□□□□ -2.26
SCFD1-216ENST00000555550 LAMB2P55268 1798 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 IGKV1D-37A0A075B6S9 117 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 GSTTP1A0A1W2PQM5 241 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 FAM25EA8MYX2 175 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 F5H5T6 163 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 H3BN98 237 aa0.93□□□□□ -2.26
SCFD1-216ENST00000555550 UPK1AO00322 258 aa0.93□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms