RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PRKACAP17612 351 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 MYL12AP19105 171 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 CFPP27918 469 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 SOX2P48431 317 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 SNU13P55769 128 aaKnown RBP16.77■□□□□ 0.28
VTI1B-205ENST00000555543 GUCA2AQ02747 115 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 ST3GAL4Q11206 333 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 SERPINA12Q8IW75 414 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 C11orf42Q8N5U0 333 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 ZNF485Q8NCK3 441 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 NRG4Q8WWG1 115 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 CHIAQ9BZP6 476 aa16.77■□□□□ 0.28
VTI1B-205ENST00000555543 MEX3AA1L020 520 aaKnown RBP16.76■□□□□ 0.27
VTI1B-205ENST00000555543 ALX3O95076 343 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 CYB5AP00167 134 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 HCKP08631 526 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 RPSAP08865 295 aaKnown RBP16.76■□□□□ 0.27
VTI1B-205ENST00000555543 ERVFRD-1P60508 538 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 ZP1P60852 638 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 SLC34A1Q06495 639 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 BLMHQ13867 455 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 NCR3LG1Q68D85 454 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 ZNF529Q6P280 563 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 C16orf87Q6PH81 154 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 C17orf107Q6ZR85 190 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 LDLRAD3Q86YD5 345 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 OR8H2Q8N162 312 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 OR52N4Q8NGI2 321 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 OR51A2Q8NGJ7 313 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 OR5D14Q8NGL3 314 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 OR52N1Q8NH53 320 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 TFAP2CQ92754 450 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 HMG20AQ9NP66 347 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 BABAM2Q9NXR7 383 aa16.76■□□□□ 0.27
VTI1B-205ENST00000555543 HAX1O00165 279 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 OGG1O15527 345 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 PSPNO60542 156 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 KDM4BO94953 1096 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 IGHV4-59P01825 116 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 SAA4P35542 130 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 UBE2E1P51965 193 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 DOC2BQ14184 412 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 ZNF146Q15072 292 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 KISS1Q15726 138 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 AHSA2Q719I0 299 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 TCF23Q7RTU1 214 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 ZFP41Q8N8Y5 198 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 OR5D13Q8NGL4 314 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 OR13C5Q8NGS8 318 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 GPR148Q8TDV2 347 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 SSMEM1Q8WWF3 244 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 SMIM19Q96E16 107 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 CHST6Q9GZX3 395 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 VCXQ9H320 206 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 SEBOXQ9HB31 216 aaPredicted RBP16.75■□□□□ 0.27
VTI1B-205ENST00000555543 NEK6Q9HC98 313 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 TAS2R4Q9NYW5 299 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 CNOT2Q9NZN8 540 aaKnown RBP16.75■□□□□ 0.27
VTI1B-205ENST00000555543 PSORS1C1Q9UIG5 152 aa16.75■□□□□ 0.27
VTI1B-205ENST00000555543 EFCAB10A6NFE3 127 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 EEF1B2P24534 225 aaKnown RBP16.74■□□□□ 0.27
VTI1B-205ENST00000555543 DLX6P56179 175 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 EDDM3BP56851 147 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 SPIN3Q5JUX0 258 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 DMKNQ6E0U4 476 aaPredicted RBP16.74■□□□□ 0.27
VTI1B-205ENST00000555543 FIP1L1Q6UN15 594 aaKnown RBP16.74■□□□□ 0.27
VTI1B-205ENST00000555543 TMEM86BQ8N661 226 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 C17orf50Q8WW18 174 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 SNX22Q96L94 193 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 NKX3-1Q99801 234 aaPredicted RBP16.74■□□□□ 0.27
VTI1B-205ENST00000555543 PLCXD1Q9NUJ7 323 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 ZNRD1Q9P1U0 126 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 FAM96BQ9Y3D0 163 aa16.74■□□□□ 0.27
VTI1B-205ENST00000555543 DSCAML1Q8TD84 2053 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 MEIOCA2RUB1 952 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 FAM181BA6NEQ2 426 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 RAB3AP20336 220 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 GABRR1P24046 479 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 C21orf33P30042 268 aaPredicted RBP16.73■□□□□ 0.27
VTI1B-205ENST00000555543 IER3P46695 156 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 AQP4P55087 323 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 FOXL1Q12952 345 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 EDDM3AQ14507 147 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 GDPD3Q7L5L3 318 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 SAXO1Q8IYX7 474 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 TPRX1Q8N7U7 411 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 C3orf56Q8N813 242 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 BPIFB6Q8NFQ5 453 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 OR4S1Q8NGB4 309 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 TMEM106AQ96A25 262 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 ORAI1Q96D31 301 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 FKBP14Q9NWM8 211 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 CHCHD3Q9NX63 227 aaKnown RBP16.73■□□□□ 0.27
VTI1B-205ENST00000555543 GSTK1Q9Y2Q3 226 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 POMT1Q9Y6A1 747 aa16.73■□□□□ 0.27
VTI1B-205ENST00000555543 A0A1W2PPH5 198 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 SIRPB1O00241 398 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 FBP1P09467 338 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 OR3A1P47881 315 aa16.72■□□□□ 0.27
VTI1B-205ENST00000555543 ACSM1Q08AH1 577 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms