RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 Q8NFD4 153 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 OR4M2Q8NGB6 313 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 AQP3Q92482 292 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 CEP19Q96LK0 163 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 RHBDL2Q9NX52 303 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 DNAJB11Q9UBS4 358 aa9.15□□□□□ -0.94
SHMT2-218ENST00000555213 MRPS28Q9Y2Q9 187 aaKnown RBP9.15□□□□□ -0.94
SHMT2-218ENST00000555213 TANC2Q9HCD6 1990 aa9.15□□□□□ -0.95
SHMT2-218ENST00000555213 OTOGQ6ZRI0 2925 aa9.15□□□□□ -0.95
SHMT2-218ENST00000555213 FLNAP21333 2647 aaKnown RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 NKX6-3A6NJ46 265 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 FOXI3A8MTJ6 420 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 SRRM5B3KS81 715 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RAB27BO00194 218 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 NDUFA2O43678 99 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 LANCL1O43813 399 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 UPK1BO75841 260 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 KDM4BO94953 1096 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 PLATP00750 562 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 MUC1P15941 1255 aaPredicted RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RAB6AP20340 208 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 GLRA1P23415 457 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 CDK2P24941 298 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 MPZP25189 248 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 CD80P33681 288 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 MNDAP41218 407 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 GZMKP49863 264 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM50BP56557 158 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 IL24Q13007 206 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 PDZK1IP1Q13113 114 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM249Q2WGJ8 235 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 MOGAT2Q3SYC2 334 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 FIP1L1Q6UN15 594 aaKnown RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RTN4RL2Q86UN3 420 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 C11orf53Q8IXP5 236 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 MKXQ8IYA7 352 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 Q8IYB0 196 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 FAM89BQ8N5H3 189 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 PNLDC1Q8NA58 520 aaKnown RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 OR5D18Q8NGL1 313 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 CLDND2Q8NHS1 167 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RAB40AQ8WXH6 277 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 S100A16Q96FQ6 103 aaKnown RBP9.14□□□□□ -0.95
SHMT2-218ENST00000555213 GPER1Q99527 375 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 TMUB1Q9BVT8 246 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 LPAR5Q9H1C0 372 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF665Q9H7R5 613 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RASL12Q9NYN1 266 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 RAB22AQ9UL26 194 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 ING4Q9UNL4 249 aa9.14□□□□□ -0.95
SHMT2-218ENST00000555213 A0A096LNT2 108 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 VGLL3A8MV65 326 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 F8VVB4 439 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 F8VWA3 439 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 AKR7A2O43488 359 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 XRCC3O43542 346 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 SPRY1O43609 319 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-218ENST00000555213 ANGPTL7O43827 346 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 RHBDL1O75783 438 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 NXPH2O95156 264 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF205O95201 554 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 LHBP01229 141 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 PGA5P0DJD9 388 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 PTHLHP12272 177 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 RPS2P15880 293 aaKnown RBP9.13□□□□□ -0.95
SHMT2-218ENST00000555213 PITPNBP48739 271 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 GMFBP60983 142 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 TEX36Q5VZQ5 186 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 STEAP3Q658P3 488 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 AWAT2Q6E213 333 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 SFRP4Q6FHJ7 346 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-218ENST00000555213 DCDC5Q6ZRR9 648 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 SLC25A26Q70HW3 274 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 OR2W3Q7Z3T1 314 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 FAM90A1Q86YD7 464 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 LYSMD2Q8IV50 215 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 CIARTQ8N365 385 aaPredicted RBP9.13□□□□□ -0.95
SHMT2-218ENST00000555213 GDPD1Q8N9F7 314 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 POC1AQ8NBT0 407 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 MAPK1IP1LQ8NDC0 245 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 DEFB108BQ8NET1 73 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 PXT1Q8NFP0 134 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 OR8B3Q8NGG8 313 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 TNFAIP8L1Q8WVP5 186 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 OR8B2Q96RD0 313 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 PALMDQ9NP74 551 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 MIOXQ9UGB7 285 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 ADAM30Q9UKF2 790 aa9.13□□□□□ -0.95
SHMT2-218ENST00000555213 CEACAM18A8MTB9 384 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TRAPPC2LH3BP13 241 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 CTDSPLO15194 276 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 PLA2G10O15496 165 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 SYNGR1O43759 233 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NOS1APO75052 506 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TPPPO94811 219 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 IGHV2-5P01817 119 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 SFTPBP07988 381 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM225BP0DP42 221 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms