RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 FAM166AQ6J272 317 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SFXN4Q6P4A7 337 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 GLIPR1L1Q6UWM5 242 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF788Q6ZQV5 615 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CLVS1Q8IUQ0 354 aaPredicted RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 OSR2Q8N2R0 312 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 BOLLQ8N9W6 283 aaKnown RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 WFDC11Q8NEX6 87 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CLDND2Q8NHS1 167 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ANGPTL6Q8NI99 470 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 PTX4Q96A99 478 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 KCTD12Q96CX2 325 aaKnown RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 SDSLQ96GA7 329 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 URM1Q9BTM9 101 aaKnown RBP6.74□□□□□ -1.33
LINC01397-201ENST00000554808 CENPOQ9BU64 300 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM59Q9BXS4 323 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 FAM234AQ9H0X4 552 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 IFT22Q9H7X7 185 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 FBLN5Q9UBX5 448 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 ETV7Q9Y603 341 aa6.74□□□□□ -1.33
LINC01397-201ENST00000554808 A0A096LNT2 108 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 PPIAL4CA0A0B4J2A2 164 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 IGKV1-12A0A0C4DH73 117 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SMIM31A0A1B0GVY4 71 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RFPL4AA6NLU0 287 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 B4DSR2 109 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RNF223E7ERA6 249 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RFPL4AL1F8VTS6 287 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 TMPRSS2O15393 492 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ADAM20O43506 726 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 NDUFB3O43676 98 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ANGPTL7O43827 346 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 CDRT1O95170 752 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ECDO95905 644 aaPredicted RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 IGKV1D-12P01611 117 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 GLAP06280 429 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SFTPBP07988 381 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 CALCBP10092 127 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 PSG2P11465 335 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 MGMTP16455 207 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RAB6AP20340 208 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SOX6P35712 828 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 GABRA2P47869 451 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 PITPNBP48739 271 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RBM11P57052 281 aaKnown RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 GNB2P62879 340 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 BLMHQ13867 455 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ARL6IP1Q15041 203 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 CTF1Q16619 201 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 CD276Q5ZPR3 534 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SFRP4Q6FHJ7 346 aaPredicted RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SLC16A12Q6ZSM3 486 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 OR4D6Q8NGJ1 314 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ACOT12Q8WYK0 555 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 AP3S1Q92572 193 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 FAM3DQ96BQ1 224 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 C1orf159Q96HA4 380 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 C18orf12Q96KH6 178 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 COX4I2Q96KJ9 171 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SNX22Q96L94 193 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 SSBP3Q9BWW4 388 aaPredicted RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 WDR13Q9H1Z4 485 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 LIN7BQ9HAP6 207 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RBFOX1Q9NWB1 397 aaKnown RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 DCAF16Q9NXF7 216 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ABRACLQ9P1F3 81 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 LPAR3Q9UBY5 353 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 CLN8Q9UBY8 286 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF222Q9UK12 451 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 RAB22AQ9UL26 194 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 ST3GAL6Q9Y274 331 aa6.73□□□□□ -1.33
LINC01397-201ENST00000554808 POLR3KQ9Y2Y1 108 aaPredicted RBP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 NIPBLQ6KC79 2804 aaeCLIP6.73□□□□□ -1.33
LINC01397-201ENST00000554808 IGKV1D-17A0A075B6S4 117 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 TRBV23-1A0A0A0MS06 115 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 IGHV4-61A0A0C4DH41 118 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 A0A1W2PPH5 198 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 SHISA3A0PJX4 238 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 METTL21EPA6NDL7 271 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM14DPA8MWL7 114 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 TNFRSF13BO14836 293 aaPredicted RBP6.72□□□□□ -1.33
LINC01397-201ENST00000554808 WNT9BO14905 357 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 CRTAPO75718 401 aaPredicted RBP6.72□□□□□ -1.33
LINC01397-201ENST00000554808 HAND1O96004 215 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 GYPAP02724 150 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 CSN2P05814 226 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 LIPFP07098 398 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 WNT2P09544 360 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 ZNF44P15621 663 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 LMO1P25800 156 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 PRDX2P32119 198 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 NPBWR2P48146 333 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 SERPINB10P48595 397 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 RORCP51449 518 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 VBP1P61758 197 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 LMO4P61968 165 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 PAX5Q02548 391 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 MXD1Q05195 221 aa6.72□□□□□ -1.33
LINC01397-201ENST00000554808 RBM39Q14498 530 aaKnown RBP6.72□□□□□ -1.33
LINC01397-201ENST00000554808 TMEM249Q2WGJ8 235 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms