RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 TGFBR2P37173 567 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 ATP1B3P54709 279 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 MTCP1P56278 107 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 EDDM3BP56851 147 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 LY6EQ16553 131 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 LDLRAD2Q5SZI1 272 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 UTS2BQ765I0 119 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 LHFPL4Q7Z7J7 247 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 OR52I1Q8NGK6 324 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 OR5R1Q8NH85 324 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 OPALINQ96PE5 141 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 SSX3Q99909 188 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 MEGF9Q9H1U4 602 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 ERVK13-1Q9NX77 482 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 HHLA2Q9UM44 414 aa12.75□□□□□ -0.37
GABRB3-207ENST00000554722 WBP4O75554 376 aaKnown RBP12.74□□□□□ -0.37
GABRB3-207ENST00000554722 TSPAN9O75954 239 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 CLIC3O95833 236 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 HAND1O96004 215 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 ZNF20P17024 532 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 PDZK1IP1Q13113 114 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 EDDM3AQ14507 147 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 C2orf68Q2NKX9 166 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 OR8H2Q8N162 312 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 FAM58AQ8N1B3 248 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 OR4S1Q8NGB4 309 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 OR5D18Q8NGL1 313 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 OR13C3Q8NGS6 347 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 OR13C9Q8NGT0 318 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 PPP1R35Q8TAP8 253 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 PIFOQ8TCI5 191 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 SNX22Q96L94 193 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 PDCD1LG2Q9BQ51 273 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 PPA2Q9H2U2 334 aa12.74□□□□□ -0.37
GABRB3-207ENST00000554722 MRPS18AQ9NVS2 196 aaKnown RBP12.74□□□□□ -0.37
GABRB3-207ENST00000554722 TRBV2A0A0J9YWF9 115 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 SNTNA6NMZ2 147 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 ZFPL1O95159 310 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 LIMS3P0CW19 117 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 LIMS4P0CW20 117 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 PRKACAP17612 351 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 GTF2A1P52655 376 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-207ENST00000554722 ACTA2P62736 377 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 ACTG2P63267 376 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 ZNF146Q15072 292 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 SLC35E4Q6ICL7 350 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 LHFPL2Q6ZUX7 228 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 GDPD3Q7L5L3 318 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 SYS1Q8N2H4 156 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 ZNF676Q8N7Q3 588 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 FAM110DQ8TAY7 271 aaPredicted RBP12.73□□□□□ -0.37
GABRB3-207ENST00000554722 HEXA-AS1Q9H8Q6 139 aa12.73□□□□□ -0.37
GABRB3-207ENST00000554722 TET2Q6N021 2002 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-207ENST00000554722 A0A1W2PPH5 198 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 FAM90A8PA6NJQ4 464 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 MPZL2O60487 215 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 TSPAN15O95858 294 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 ZNF728P0DKX0 622 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 PRKACBP22694 351 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 RAB40BQ12829 278 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 HIST2H2BDQ6DRA6 164 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 XAF1Q6GPH4 301 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 C10orf67Q8IYJ2 551 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 CNIH3Q8TBE1 160 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 RGP1Q92546 391 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-207ENST00000554722 SPSB1Q96BD6 273 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 Q96MT0 163 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 ZCCHC4Q9H5U6 513 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 SEBOXQ9HB31 216 aaPredicted RBP12.72□□□□□ -0.37
GABRB3-207ENST00000554722 HMG20AQ9NP66 347 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 GSTK1Q9Y2Q3 226 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 SIGLEC9Q9Y336 463 aa12.72□□□□□ -0.37
GABRB3-207ENST00000554722 ODF3BA8MYP8 253 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 SIRPB1O00241 398 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 MMP23AO75900 390 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 KDM4BO94953 1096 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 FADS2O95864 444 aaKnown RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 MT-ND2P03891 347 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 IGHV1-8P0DP01 117 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 JUNBP17275 347 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 GABRR1P24046 479 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 OR3A1P47881 315 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 RAB13P51153 203 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 ZP1P60852 638 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 GRK1Q15835 563 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 LRRC36Q1X8D7 754 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 LRRC75BQ2VPJ9 315 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 PLA1AQ53H76 456 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 LPCAT4Q643R3 524 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 Q8IYB0 196 aa12.71□□□□□ -0.37
GABRB3-207ENST00000554722 NKX3-1Q99801 234 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 FGF20Q9NP95 211 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 SMPD3Q9NY59 655 aaPredicted RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 RPL36Q9Y3U8 105 aaKnown RBP12.71□□□□□ -0.37
GABRB3-207ENST00000554722 CHST1O43916 411 aa12.7□□□□□ -0.38
GABRB3-207ENST00000554722 OR2H2O95918 312 aa12.7□□□□□ -0.38
GABRB3-207ENST00000554722 ARG1P05089 322 aa12.7□□□□□ -0.38
GABRB3-207ENST00000554722 CSF1P09603 554 aa12.7□□□□□ -0.38
GABRB3-207ENST00000554722 PEX2P28328 305 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms