RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 SFRP4Q6FHJ7 346 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 FAM57BQ71RH2 274 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 PGAP1Q75T13 922 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 LRRTM1Q86UE6 522 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 NR2C2APQ86WQ0 139 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 CDH26Q8IXH8 852 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 RDH10Q8IZV5 341 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 FGFRL1Q8N441 504 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 OR51A4Q8NGJ6 313 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 PPP1R14AQ96A00 147 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 FOXRED1Q96CU9 486 aaPredicted RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 ADAT1Q9BUB4 502 aaKnown RBP8.75□□□□□ -1.01
SHMT2-215ENST00000554656 TNFRSF19Q9NS68 423 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 MMP24Q9Y5R2 645 aa8.75□□□□□ -1.01
SHMT2-215ENST00000554656 IFITM5A6NNB3 132 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 LGALS8O00214 317 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 RGS5O15539 181 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 XRCC2O43543 280 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 DHRS3O75911 302 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 MELTFP08582 738 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 CALCBP10092 127 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 IRF2P14316 349 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 DDOSTP39656 456 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 CAV3P56539 151 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 KRTAP10-3P60369 221 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 DEFA6Q01524 100 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ODF4Q2M2E3 257 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 PDLIM3Q53GG5 364 aaPredicted RBP8.74□□□□□ -1.01
SHMT2-215ENST00000554656 GLYATL3Q5SZD4 288 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 GPR157Q5UAW9 335 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 GLT8D1Q68CQ7 371 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ZNF529Q6P280 563 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 Q6YL49 198 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ZNF826PQ6ZT77 177 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 MRPL21Q7Z2W9 205 aaKnown RBP8.74□□□□□ -1.01
SHMT2-215ENST00000554656 SERPINA12Q8IW75 414 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 BOLLQ8N9W6 283 aaKnown RBP8.74□□□□□ -1.01
SHMT2-215ENST00000554656 OR5D14Q8NGL3 314 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 OR11L1Q8NGX0 322 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 OR51E1Q8TCB6 317 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 PP6455Q8WZ26 134 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ERGIC1Q969X5 290 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 TECTBQ96PL2 329 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 PCGF1Q9BSM1 259 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 CHIAQ9BZP6 476 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 SIRPDQ9H106 197 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 MIXL1Q9H2W2 232 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 OPA3Q9H6K4 179 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ABCB9Q9NP78 766 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 BRD7Q9NPI1 651 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 GPR84Q9NQS5 396 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 C1RLQ9NZP8 487 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 RNF7Q9UBF6 113 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 SPATA2Q9UM82 520 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 AK6Q9Y3D8 172 aaKnown RBP8.74□□□□□ -1.01
SHMT2-215ENST00000554656 ETV7Q9Y603 341 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 V9GYS6 101 aa8.74□□□□□ -1.01
SHMT2-215ENST00000554656 PRKDCP78527 4128 aaKnown RBP8.73□□□□□ -1.01
SHMT2-215ENST00000554656 TRAV8-7A0A075B6U6 113 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 CENPVL3A0A0U1RRI6 287 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 A0A1B0GW55 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 A0A1W2PPK0 400 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 SLC17A2O00624 439 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ADAM20O43506 726 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 TPPPO94811 219 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 APOA1P02647 267 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 GYPAP02724 150 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ALDOBP05062 364 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L2P0CJ85 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L3P0CJ86 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L4P0CJ87 422 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L5P0CJ88 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L6P0CJ89 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L7P0CJ90 424 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 SLC2A1P11166 492 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ZNF20P17024 532 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ATF1P18846 271 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 RAG2P55895 527 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 OR10A3P58181 314 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 MALLQ13021 153 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 C1orf100Q5SVJ3 147 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 IDNKQ5T6J7 187 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 DUX4L9Q6RFH8 374 aaPredicted RBP8.73□□□□□ -1.01
SHMT2-215ENST00000554656 FIP1L1Q6UN15 594 aaKnown RBP8.73□□□□□ -1.01
SHMT2-215ENST00000554656 BAIAP2L2Q6UXY1 529 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 UTS2BQ765I0 119 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 WDR86Q86TI4 376 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 FAM90A1Q86YD7 464 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 GCSAMQ8N6F7 178 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 KIR3DL3Q8N743 410 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 OR56B2PQ8NGI1 322 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 OR14K1Q8NGZ2 314 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 ZDHHC16Q969W1 377 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 SPSB4Q96A44 273 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 GFI1Q99684 422 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 CCDC32Q9BV29 185 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 FN3KRPQ9HA64 309 aa8.73□□□□□ -1.01
SHMT2-215ENST00000554656 NEK6Q9HC98 313 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms