RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 MTCP1P56278 107 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 RAB5BP61020 215 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 CLN3Q13286 438 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 UNQ6126/PRO20091Q6UXV3 157 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 OR10R2Q8NGX6 335 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 AQP3Q92482 292 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 CPNE2Q96FN4 548 aaPredicted RBP10.13□□□□□ -0.79
SHMT2-212ENST00000554467 ARHGAP5-AS1Q96IT6 56 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 UQCC1Q9NVA1 299 aa10.13□□□□□ -0.79
SHMT2-212ENST00000554467 A0A1B0GW55 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 WRBO00258 174 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L2P0CJ85 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L3P0CJ86 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L4P0CJ87 422 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L5P0CJ88 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L6P0CJ89 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4L7P0CJ90 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 AGAP20933 346 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 ACTBP60709 375 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 ACTG1P63261 375 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 PEA15Q15121 130 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 MPPED2Q15777 294 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM178AQ8NBL3 297 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 OR51T1Q8NGJ9 327 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 RBM14Q96PK6 669 aaKnown RBP10.12□□□□□ -0.79
SHMT2-212ENST00000554467 LRFN3Q9BTN0 628 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 CHST5Q9GZS9 411 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 CRIM1Q9NZV1 1036 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 COMMD9Q9P000 198 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 METTL1Q9UBP6 276 aaKnown RBP10.12□□□□□ -0.79
SHMT2-212ENST00000554467 DUX4Q9UBX2 424 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 IGKV1-27A0A075B6S5 117 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 A0A0D9SG52 128 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 OR5H14A6NHG9 310 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM225BP0DP42 221 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 RAB6AP20340 208 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM50BP56557 158 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 PDCD1Q15116 288 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 RAB12Q6IQ22 244 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 HIST1H2BAQ96A08 127 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM45BQ96B21 275 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 PFDN5Q99471 154 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 GGACTQ9BVM4 153 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 SEC11CQ9BY50 192 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 ARHGAP21Q5T5U3 1957 aa10.12□□□□□ -0.79
SHMT2-212ENST00000554467 SLC22A20A6NK97 555 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 LRP3O75074 770 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PMP2P02689 132 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 NDUFB7P17568 137 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 GABRR1P24046 479 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 CD82P27701 267 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 THBS4P35443 961 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 TAS2R19P59542 299 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 MST1LQ2TV78 715 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PNLDC1Q8NA58 520 aaKnown RBP10.11□□□□□ -0.79
SHMT2-212ENST00000554467 BHLHE23Q8NDY6 225 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PIGCQ92535 297 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 RAB3CQ96E17 227 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PARPBPQ9NWS1 579 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 DMRT1Q9Y5R6 373 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PI3P19957 117 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 CD34P28906 385 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 HRH1P35367 487 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 GSK3AP49840 483 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 F2RL1P55085 397 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 RNASE10Q5GAN6 216 aaKnown RBP10.11□□□□□ -0.79
SHMT2-212ENST00000554467 ARRDC1Q8N5I2 433 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 MARS2Q96GW9 593 aaKnown RBP10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PRR13Q9NZ81 148 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 KANTRA0A1W2PQU2 76 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 C5orf51A6NDU8 294 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 NGFP01138 241 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 CD8AP01732 235 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 NQO2P16083 231 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PCBD1P61457 104 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 GTF3C1Q12789 2109 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 IGFBP7Q16270 282 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 RNF212Q495C1 297 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 UNQ6494/PRO21346Q6UXR6 183 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 KCNG3Q8TAE7 436 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 SSC4DQ8WTU2 575 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 C14orf79Q96F83 325 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 PHYHIPLQ96FC7 376 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 S100A13Q99584 98 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 MBD2Q9UBB5 411 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 KALRNO60229 2985 aa10.11□□□□□ -0.79
SHMT2-212ENST00000554467 INTS1Q8N201 2190 aaKnown RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 SPTA1P02549 2419 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF705EA8MWA4 302 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 C9JQL5 133 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 C3orf80F5H4A9 247 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 EFSO43281 561 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 IFNA6P05013 189 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 RCC1P18754 421 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 RAB1AP62820 205 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 FAM3AP98173 230 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 NKAPLQ5M9Q1 402 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 CCDC107Q8WV48 283 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms