RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 CLDN18P56856 261 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR2B6P58173 313 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ERVFC1-1P60608 527 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 PPP3R1P63098 170 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 BTG2P78543 158 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 IFITM2Q01629 132 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 MFAP5Q13361 173 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM53BQ14153 422 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ZSWIM7Q19AV6 140 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 LINC01620Q4KN68 170 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CT45A2Q5DJT8 189 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ELFN2Q5R3F8 820 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 DDI2Q5TDH0 399 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TIGD3Q6B0B8 471 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RTL6Q6ICC9 239 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR52W1Q6IF63 320 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RPL13AP3Q6NVV1 102 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CNIH2Q6PI25 160 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM131AQ6UXB0 335 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CLEC18BQ6UXF7 455 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF841Q6ZN19 808 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 C17orf82Q86X59 251 aaPredicted RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 METTL27Q8N6F8 245 aaPredicted RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF615Q8N8J6 731 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CYB561A3Q8NBI2 242 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 NECAP1Q8NC96 275 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 NPEPL1Q8NDH3 523 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 C19orf18Q8NEA5 215 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 STXBP6Q8NFX7 210 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR52L1Q8NGH7 329 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR6F1Q8NGZ6 308 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TMEM37Q8WXS4 190 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC35B4Q969S0 331 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 DIRAS2Q96HU8 199 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ST6GAL2Q96JF0 529 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 MAP3K3Q99759 626 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TMED9Q9BVK6 235 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 RERGLQ9H628 205 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 CACYBPQ9HB71 228 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 TMEM27Q9HBJ8 222 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ADGRL4Q9HBW9 690 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 ACKR4Q9NPB9 350 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 B3GAT2Q9NPZ5 323 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 OR2S2Q9NQN1 319 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 INPP5EQ9NRR6 644 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 C14orf105Q9NVL8 296 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 PLEK2Q9NYT0 353 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 GNG12Q9UBI6 72 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 FBXL4Q9UKA2 621 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 MRTO4Q9UKD2 239 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 PAIP2BQ9ULR5 123 aaKnown RBP4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 BAIAP2Q9UQB8 552 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 SLC35A3Q9Y2D2 325 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 URGCP-MRPS24S4R325 110 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 SPTBP11277 2137 aa4.4□□□□□ -1.71
MTHFD1-206ENST00000554353 MPDZO75970 2070 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SPTBN1Q01082 2364 aaKnown RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 IGKV1D-42A0A075B6H8 117 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A087WUJ7 227 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 A0A1W2PPI3 338 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 DAPL1A0PJW8 107 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 MEIOCA2RUB1 952 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 EFCAB7A8K855 629 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 B4DXG7 233 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RNASEK-C17orf49H0YIS7 233 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 H3BMH7 237 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 H3BTX0 84 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 CASKO14936 926 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 TOX3O15405 576 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SRPX2O60687 465 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 CST4P01036 141 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 CD1CP29017 333 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SHC1P29353 583 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ATP1B3P54709 279 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 OR12D2P58182 307 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 AP3S2P59780 193 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ERVK-25P63136 954 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 LCN2P80188 198 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 GAGE5Q13069 117 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 GAGE6Q13070 117 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 MADCAM1Q13477 382 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 GGTLC2Q14390 218 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 TAB1Q15750 504 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SGCAQ16586 387 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 NDUFAF6Q330K2 333 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 KLHL12Q53G59 568 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PHLDA2Q53GA4 152 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 PYDC2Q56P42 97 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 FAM27D1Q5T7N8 215 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 DMKNQ6E0U4 476 aaPredicted RBP4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF544Q6NX49 715 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 UNQ9370/PRO34162Q6UXP9 181 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RTL4Q6ZR62 310 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 C9orf139Q6ZV77 190 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 SSX6Q7RTT6 188 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 ZNF550Q7Z398 422 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 P4HA3Q7Z4N8 544 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 CATSPERDQ86XM0 798 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 RAB43Q86YS6 212 aa4.39□□□□□ -1.71
MTHFD1-206ENST00000554353 GPALPP1Q8IXQ4 340 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms