RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SEBOXQ9HB31 216 aaPredicted RBP16.72■□□□□ 0.27
FOXA1-203ENST00000553751 RNASEK-C17orf49H0YIS7 233 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 MYL12BO14950 172 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 HAND1O96004 215 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 CD2P06729 351 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 CALCBP10092 127 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 PRKACAP17612 351 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 RAB3AP20336 220 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 PRTN3P24158 256 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 WNT4P56705 351 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 TAS2R43P59537 309 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 RPL31P62899 125 aaKnown RBP16.71■□□□□ 0.27
FOXA1-203ENST00000553751 PRB3Q04118 309 aaPredicted RBP16.71■□□□□ 0.27
FOXA1-203ENST00000553751 ZNF146Q15072 292 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 SPIN3Q5JUX0 258 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 SAXO1Q8IYX7 474 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 DUX5Q96PT3 197 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 ANKRD60Q9BZ19 345 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 VCX3BQ9H321 246 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 METTL8Q9H825 291 aaKnown RBP16.71■□□□□ 0.27
FOXA1-203ENST00000553751 ZMAT3Q9HA38 289 aaKnown RBP16.71■□□□□ 0.27
FOXA1-203ENST00000553751 HMG20AQ9NP66 347 aa16.71■□□□□ 0.27
FOXA1-203ENST00000553751 TRBV5-5A0A0J9YX44 114 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 TMEM82A0PJX8 343 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 CLDN34H7C241 214 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 CDK1P06493 297 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 MYF6P23409 242 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 RPS11P62280 158 aaKnown RBP eCLIP16.7■□□□□ 0.26
FOXA1-203ENST00000553751 KLRD1Q13241 179 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 SLC9A3R2Q15599 337 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 TMEM200BQ69YZ2 307 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 FIP1L1Q6UN15 594 aaKnown RBP16.7■□□□□ 0.26
FOXA1-203ENST00000553751 IZUMO2Q6UXV1 221 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 PIP4P2Q8N4L2 257 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 NANOGP1Q8N7R0 232 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 OR4M1Q8NGD0 313 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 PAK1IP1Q9NWT1 392 aaPredicted RBP16.7■□□□□ 0.26
FOXA1-203ENST00000553751 TENM1Q9UKZ4 2725 aa16.7■□□□□ 0.26
FOXA1-203ENST00000553751 DUSP1P28562 367 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 SNU13P55769 128 aaKnown RBP16.69■□□□□ 0.26
FOXA1-203ENST00000553751 ACTG1P63261 375 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 ZNF273Q14593 569 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 YIF1BQ5BJH7 314 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 RNLSQ5VYX0 342 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 C17orf107Q6ZR85 190 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 OR8H2Q8N162 312 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 ZSCAN4Q8NAM6 433 aaPredicted RBP16.69■□□□□ 0.26
FOXA1-203ENST00000553751 SGCDQ92629 289 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 ORAI1Q96D31 301 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 SNX22Q96L94 193 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 RHOFQ9HBH0 211 aa16.69■□□□□ 0.26
FOXA1-203ENST00000553751 A0A0U1RQK1 487 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 GABRPO00591 440 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 PSPNO60542 156 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 RNASE1P07998 156 aaKnown RBP16.68■□□□□ 0.26
FOXA1-203ENST00000553751 GUCA2AQ02747 115 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 RIPK1Q13546 671 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 BLMHQ13867 455 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 Q499Y3 187 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 NCR3LG1Q68D85 454 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 OR52N4Q8NGI2 321 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 CPNE2Q96FN4 548 aaPredicted RBP16.68■□□□□ 0.26
FOXA1-203ENST00000553751 CDCA4Q9BXL8 241 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 NOX4Q9NPH5 578 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 ERGIC3Q9Y282 383 aa16.68■□□□□ 0.26
FOXA1-203ENST00000553751 PNMA8CA0A1B0GUJ8 204 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 PTGES3LE9PB15 166 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 MAGEB3O15480 346 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 HOXA3O43365 443 aaPredicted RBP16.67■□□□□ 0.26
FOXA1-203ENST00000553751 ATP6V1G2O95670 118 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 TMEM225BP0DP42 221 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 CCL3L1P16619 93 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 SLC35A2P78381 396 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 HCP5Q6MZN7 132 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 Q6YL49 198 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 C11orf42Q8N5U0 333 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 OR5D13Q8NGL4 314 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 TBC1D15Q8TC07 691 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 MYDGFQ969H8 173 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 ZDHHC16Q969W1 377 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 MND1Q9BWT6 205 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 SCN3BQ9NY72 215 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 GSTK1Q9Y2Q3 226 aa16.67■□□□□ 0.26
FOXA1-203ENST00000553751 A0A1W2PPH5 198 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 ALDOBP05062 364 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 CD1AP06126 327 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 MELTFP08582 738 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 IGFBP3P17936 291 aaPredicted RBP16.66■□□□□ 0.26
FOXA1-203ENST00000553751 CELP19835 753 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 GABRR1P24046 479 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 HSPA13P48723 471 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 UBE2E1P51965 193 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 DLX6P56179 175 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 EDDM3BP56851 147 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 PPP3R1P63098 170 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 BDH1Q02338 343 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 GDPD3Q7L5L3 318 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 TCF23Q7RTU1 214 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 PNKDQ8N490 385 aa16.66■□□□□ 0.26
FOXA1-203ENST00000553751 PXT1Q8NFP0 134 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms