RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 ASCL3Q9NQ33 180 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 LHX9Q9NQ69 397 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 HYOU1Q9Y4L1 999 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 V9GYY9 64 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 PLXND1Q9Y4D7 1925 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 TRIP11Q15643 1979 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 ITPR2Q14571 2701 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 CABIN1Q9Y6J0 2220 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 DOPEY2Q9Y3R5 2298 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 DOPEY1Q5JWR5 2465 aa2.06□□□□□ -2.08
SCFD1-210ENST00000553693 USP9YO00507 2555 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 NF1P21359 2839 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SPTAN1Q13813 2472 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ANKRD65E5RJM6 399 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 GABRPO00591 440 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PIRO00625 290 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 NME4O00746 187 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RFXANKO14593 260 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PRMT5O14744 637 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 HCRTO43612 131 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PAHP00439 452 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CATP04040 527 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 GLAP06280 429 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 KLK1P06870 262 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 GNAO1P09471 354 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CISD3P0C7P0 127 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RAB3AP20336 220 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 IVDP26440 423 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PCK1P35558 622 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CFHR2P36980 270 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RBM34P42696 430 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF121P58317 390 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RPL10AP62906 217 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ST3GAL4Q11206 333 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SRSF6Q13247 344 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PON3Q15166 354 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SYCP1Q15431 976 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 C5orf64Q2M2E5 130 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 DUPD1Q68J44 220 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ERICH5Q6P6B1 374 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ARL9Q6T311 187 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 NPSR1Q6W5P4 371 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 TMPRSS11AQ6ZMR5 421 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF621Q6ZSS3 439 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RFLNAQ6ZTI6 216 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 NDUFAF7Q7L592 441 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SSX6Q7RTT6 188 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF695Q8IW36 515 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SLC30A8Q8IWU4 369 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 BBS7Q8IWZ6 715 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 DAW1Q8N136 415 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 ZNF615Q8N8J6 731 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 WDR31Q8NA23 367 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 OR11H7Q8NGC8 314 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 OR4D6Q8NGJ1 314 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 OR6K2Q8NGY2 324 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SPPL2BQ8TCT7 592 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 C2orf15Q8WU43 125 aaKnown RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 IFT81Q8WYA0 676 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RERGQ96A58 199 aaPredicted RBP2.05□□□□□ -2.08
SCFD1-210ENST00000553693 RPEQ96AT9 228 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SEH1LQ96EE3 360 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 GALNT14Q96FL9 552 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 BTN2A3PQ96KV6 586 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 PKMYT1Q99640 499 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SPIN2AQ99865 258 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 GABRG3Q99928 467 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 SPIN2BQ9BPZ2 258 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 COPS4Q9BT78 406 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 HINT2Q9BX68 163 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 MED4Q9NPJ6 270 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CFL2Q9Y281 166 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 OTOGQ6ZRI0 2925 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CRYBG3Q68DQ2 2970 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 DNHD1Q96M86 4753 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 OBSL1O75147 1896 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 MYLKQ15746 1914 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 DENND4CQ5VZ89 1909 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 CREBBPQ92793 2442 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 LRRK2Q5S007 2527 aa2.05□□□□□ -2.08
SCFD1-210ENST00000553693 IGLV11-55A0A075B6I3 123 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 INS-IGF2F8WCM5 200 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 DFFAO00273 331 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 MYL12BO14950 172 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 SLC16A4O15374 487 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 COCHO43405 550 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ENTPD5O75356 428 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 AQP8O94778 261 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 SEMA3DO95025 777 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 YEATS4O95619 227 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 MOSP00540 346 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CD37P11049 281 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 PRPS2P11908 318 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 ANK1P16157 1881 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 DTYMKP23919 212 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 HTR2CP28335 458 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 PFN2P35080 140 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CXCL5P42830 114 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 RND2P52198 227 aa2.04□□□□□ -2.08
SCFD1-210ENST00000553693 CDKN2DP55273 166 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms