RNA–Protein interactions for RNA: ENST00000552188.1

CCDC65-204, Transcript of coiled-coil domain containing 65, humanhuman

TSL 3

Gene CCDC65, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-204ENST00000552188 SPSB1Q96BD6 273 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ADAT3Q96EY9 351 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 GAFA1Q96PS6 74 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 S100A13Q99584 98 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DCTN5Q9BTE1 182 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ZCCHC4Q9H5U6 513 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ZMAT3Q9HA38 289 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 ELL3Q9HB65 397 aaPredicted RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 TNFRSF19Q9NS68 423 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 MRPS18AQ9NVS2 196 aaKnown RBP4.88□□□□□ -1.63
CCDC65-204ENST00000552188 SCN3BQ9NY72 215 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 DUX4Q9UBX2 424 aa4.88□□□□□ -1.63
CCDC65-204ENST00000552188 IGKV1D-17A0A075B6S4 117 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 TRBV23-1A0A0A0MS06 115 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 IGHV1-69DA0A0B4J2H0 117 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CENPVL3A0A0U1RRI6 287 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 BTBD17A6NE02 478 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CASQ2O14958 399 aaPredicted RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SPRY1O43609 319 aaPredicted RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SULT1B1O43704 296 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 WBP4O75554 376 aaKnown RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 PAHP00439 452 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 KNG1P01042 644 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 FSHBP01225 129 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 IGHV1-69P01742 117 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 TK1P04183 234 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CRYBA1P05813 215 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 TMEM225BP0DP42 221 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SELLP14151 372 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 RAB3AP20336 220 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 BCL3P20749 454 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 GABRR1P24046 479 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 MPZP25189 248 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SOX2P48431 317 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CEBPDP49716 269 aaPredicted RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 ETV1P50549 477 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 GTF2A1P52655 376 aaPredicted RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 EDDM3BP56851 147 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 TAS2R43P59537 309 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 RPL31P62899 125 aaKnown RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 UBA52P62987 128 aaKnown RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 PPP3R1P63098 170 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 COL10A1Q03692 680 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SCN1BQ07699 218 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CCDC58Q4VC31 144 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 RUSC1-AS1Q66K80 236 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 AHSA2Q719I0 299 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 FAM58AQ8N1B3 248 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 FGFRL1Q8N441 504 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 KIR3DL3Q8N743 410 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 OR4M1Q8NGD0 313 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 OR51A4Q8NGJ6 313 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 OR5D13Q8NGL4 314 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 OR10AC1Q8NH08 325 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 GPR148Q8TDV2 347 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 FAM216AQ8WUB2 273 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 GGHQ92820 318 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SDSLQ96GA7 329 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 DUX5Q96PT3 197 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 TBX15Q96SF7 602 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 PDCD1LG2Q9BQ51 273 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 FAM192AQ9GZU8 254 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SIRPDQ9H106 197 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 SIRT7Q9NRC8 400 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 BABAM2Q9NXR7 383 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 MTCH1Q9NZJ7 389 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CKLFQ9UBR5 152 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 DIMT1Q9UNQ2 313 aaKnown RBP4.87□□□□□ -1.63
CCDC65-204ENST00000552188 ERGIC3Q9Y282 383 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 GSTK1Q9Y2Q3 226 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 MAB21L2Q9Y586 359 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 CUBNO60494 3623 aa4.87□□□□□ -1.63
CCDC65-204ENST00000552188 IGKV1-27A0A075B6S5 117 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 PNMA8CA0A1B0GUJ8 204 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 A0A1W2PRD5 423 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 A0A1W2PRF3 423 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 A0A1W2PRM7 423 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 FUOMA2VDF0 154 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 DNAJC9-AS1A6NH13 148 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 PTGES3LE9PB15 166 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 E9PI62 339 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 M0R1W7 72 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 SIRPB1O00241 398 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 SH2D1BO14796 132 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 ANGPTL7O43827 346 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 XPNPEP2O43895 674 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 ZFPL1O95159 310 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 HAND1O96004 215 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 CSTBP04080 98 aaKnown RBP4.86□□□□□ -1.63
CCDC65-204ENST00000552188 FBP1P09467 338 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 LIMS3P0CW19 117 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 LIMS4P0CW20 117 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 CALCBP10092 127 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 PIPP12273 146 aaPredicted RBP4.86□□□□□ -1.63
CCDC65-204ENST00000552188 ZNF44P15621 663 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 AMY2BP19961 511 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 PRTN3P24158 256 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 LGALS4P56470 323 aa4.86□□□□□ -1.63
CCDC65-204ENST00000552188 ERVFRD-1P60508 538 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms