RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 TMEM106BQ9NUM4 274 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TAS2R3Q9NYW6 316 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 VAPAQ9P0L0 249 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 TAAR3PQ9P1P4 343 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 PSMC3IPQ9P2W1 217 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 KAAG1Q9UBP8 84 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DUX4Q9UBX2 424 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 SLC7A8Q9UHI5 535 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 AURKCQ9UQB9 309 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF443Q9Y2A4 671 aaPredicted RBP1.85□□□□□ -2.11
CPSF6-207ENST00000551516 STARD10Q9Y365 291 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 NPTNQ9Y639 398 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 AUP1Q9Y679 476 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 DNAH10Q8IVF4 4471 aa1.85□□□□□ -2.11
CPSF6-207ENST00000551516 A0A087WYN8 130 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 EXOC1LA0A1B0GW35 172 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 WI2-2373I1.2A0A1W2PRP0 233 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM114B3SHH9 223 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 E9PBE3 544 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 RNASEK-C17orf49H0YIS7 233 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 H3BSA7 217 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 LGALS8O00214 317 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 DCTN6O00399 190 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 FBP2O00757 339 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SH2D1BO14796 132 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PPIHO43447 177 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 IDH3BO43837 385 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR2T1O43869 369 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 NOL3O60936 208 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SCGB2A1O75556 95 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 NXPH4O95158 308 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 NUDT14O95848 222 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 KRT16P08779 473 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR8G3PP0DMU2 310 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 COX5BP10606 129 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 GP9P14770 177 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 HPGDP15428 266 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF32P17041 273 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 FUT1P19526 365 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ATP6V1C1P21283 382 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 BGNP21810 368 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PCMT1P22061 227 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PHBP35232 272 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SRP14P37108 136 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 CAPGP40121 348 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC1A6P48664 564 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 CAMLGP49069 296 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TGM4P49221 684 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 RAG2P55895 527 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 DLX1P56177 255 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ACTG1P63261 375 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 FMODQ06828 376 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PMS2P3Q13401 168 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 KLF5Q13887 457 aaPredicted RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SELPLGQ14242 412 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF146Q15072 292 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR1Q1Q15612 314 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 MPPED2Q15777 294 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 HAGHQ16775 308 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PCK2Q16822 640 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 WHAMMP3Q1A5X7 153 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 LIN52Q52LA3 116 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 KLHL12Q53G59 568 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PABPC1L2AQ5JQF8 200 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TEX36Q5VZQ5 186 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 WDR25Q64LD2 544 aaPredicted RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM225Q6GV28 225 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 STEAP1BQ6NZ63 245 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ULK3Q6PHR2 472 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 BRD3OSQ6XYD6 125 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 Q6ZTC4 211 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ABHD12BQ7Z5M8 362 aaPredicted RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 NKAIN4Q8IVV8 208 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ZNF440Q8IYI8 595 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 DYNAPQ8N1N2 210 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 GPR137CQ8N3F9 429 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC30A7Q8NEW0 376 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR4K5Q8NGD3 323 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR56B1Q8NGI3 324 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR6T1Q8NGN1 323 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 CDC26Q8NHZ8 85 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SYNPRQ8TBG9 265 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC25A40Q8TBP6 338 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 AENQ8WTP8 325 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 CHPT1Q8WUD6 406 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC7A6Q92536 515 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 PINX1Q96BK5 328 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TAMM41Q96BW9 452 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TUBGCP3Q96CW5 907 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC35G5Q96KT7 338 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR52B2Q96RD2 323 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 GPA33Q99795 319 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 RHOXF2Q9BQY4 288 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 SLC30A2Q9BRI3 323 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 MCRIP2Q9BUT9 160 aaKnown RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 OR2H1Q9GZK4 316 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TLNRD1Q9H1K6 362 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 TMEM38AQ9H6F2 299 aa1.84□□□□□ -2.11
CPSF6-207ENST00000551516 WDR55Q9H6Y2 383 aaPredicted RBP1.84□□□□□ -2.11
CPSF6-207ENST00000551516 ELL3Q9HB65 397 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms