RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 EDDM3AQ14507 147 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 RPL13AP3Q6NVV1 102 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 SHFQ7M4L6 423 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-222ENST00000551425 OR6N2Q8NGY6 317 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 IL17DQ8TAD2 202 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 SNX22Q96L94 193 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 GON7Q9BXV9 100 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 EGLN3Q9H6Z9 239 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 CDH10Q9Y6N8 788 aa9.31□□□□□ -0.92
PTCH1-222ENST00000551425 A0A0U1RQV5 110 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 TMEM82A0PJX8 343 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 TRIM64CA6NLI5 447 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 AP4M1O00189 453 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 PSMD9O00233 223 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 GSC2O15499 205 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 GADD45GO95257 159 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 ELANEP08246 267 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 SPNP16150 400 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 IFNGR2P38484 337 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 RIPPLY1Q0D2K3 151 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 GPR50Q13585 617 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 HLA-DRB5Q30154 266 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 ZNF684Q5T5D7 378 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 GLYATQ6IB77 296 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 BAIAP2L2Q6UXY1 529 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 ERI1Q8IV48 349 aaKnown RBP9.3□□□□□ -0.92
PTCH1-222ENST00000551425 BATF2Q8N1L9 274 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 FAM71E2Q8N5Q1 922 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 RNF148Q8N7C7 305 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 TPRX1Q8N7U7 411 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 GNPDA2Q8TDQ7 276 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 DDB2Q92466 427 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 MCUR1Q96AQ8 359 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 ISYNA1Q9NPH2 558 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 IL20Q9NYY1 176 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 DNAJB9Q9UBS3 223 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 UBE2J1Q9Y385 318 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-222ENST00000551425 DSCAML1Q8TD84 2053 aa9.3□□□□□ -0.92
PTCH1-222ENST00000551425 PQLC2LA1A4F0 135 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 A8MZ25 164 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 NRASP01111 189 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 OR8U8P0C7N1 319 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 ZSCAN26Q16670 478 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 PRAMEF5Q5TYX0 476 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 HEPN1Q6WQI6 88 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 OR11H1Q8NG94 326 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 FAM162AQ96A26 154 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 SPATA25Q9BR10 227 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 CADM1Q9BY67 442 aaKnown RBP9.29□□□□□ -0.92
PTCH1-222ENST00000551425 SEBOXQ9HB31 216 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-222ENST00000551425 ZNF286AQ9HBT8 521 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 PCDHB16Q9NRJ7 776 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 C19orf73Q9NVV2 129 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 MAGEL2Q9UJ55 1249 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 ENPP5Q9UJA9 477 aa9.29□□□□□ -0.92
PTCH1-222ENST00000551425 ACOD1A6NK06 481 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PRR23D1E9PI22 279 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-222ENST00000551425 TOR1AO14656 332 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 LYNP07948 512 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PRR23D2P0DMB1 279 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-222ENST00000551425 IGHV4-30-4P0DP06 118 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 TMEM11P17152 192 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 CDK2P24941 298 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PEX2P28328 305 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 ERP29P30040 261 aaKnown RBP9.28□□□□□ -0.92
PTCH1-222ENST00000551425 GSTT1P30711 240 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PRRX1P54821 245 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 IL24Q13007 206 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 TRIM25Q14258 630 aaKnown RBP9.28□□□□□ -0.92
PTCH1-222ENST00000551425 GRK1Q15835 563 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 ASPHD1Q5U4P2 390 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 ASRGL1Q7L266 308 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 TRAPPC6BQ86SZ2 158 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 OR52N4Q8NGI2 321 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 OR8D4Q8NGM9 314 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 OR56B4Q8NH76 319 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 OTOSQ8NHW6 89 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PKIBQ9C010 78 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 GAL3ST2Q9H3Q3 398 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 GORASP2Q9H8Y8 452 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 PIGLQ9Y2B2 252 aa9.28□□□□□ -0.92
PTCH1-222ENST00000551425 A0A087X0M5 115 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 A0A1B0GX30 115 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 FAM172BPA6NC97 362 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 IGLV3-1P01715 115 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 IGHG4P01861 327 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 IGHA1P01876 353 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 IFNA6P05013 189 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 NCK1P16333 377 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 GPR12P47775 334 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 P2RX3P56373 397 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 CFHR3Q02985 330 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 HES1Q14469 280 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 TMEM42Q69YG0 159 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 SATL1Q86VE3 508 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 DHFR2Q86XF0 187 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 LYPD6Q86Y78 171 aa9.27□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF454Q8N9F8 522 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms