RNA–Protein interactions for RNA: ENST00000550709.5

TROAP-213, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-213ENST00000550709 KLF17Q5JT82 389 aaPredicted RBP11.35□□□□□ -0.59
TROAP-213ENST00000550709 FAM27D1Q5T7N8 215 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
TROAP-213ENST00000550709 SAXO1Q8IYX7 474 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 FAM185AQ8N0U4 392 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 MS4A15Q8N5U1 240 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 ZSCAN4Q8NAM6 433 aaPredicted RBP11.35□□□□□ -0.59
TROAP-213ENST00000550709 OR4M1Q8NGD0 313 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 OR10K1Q8NGX5 313 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 NR1H4Q96RI1 486 aaPredicted RBP11.35□□□□□ -0.59
TROAP-213ENST00000550709 MGLLQ99685 303 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 DCTN5Q9BTE1 182 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 HMG20AQ9NP66 347 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 ING4Q9UNL4 249 aa11.35□□□□□ -0.59
TROAP-213ENST00000550709 GPR37O15354 613 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 TOX4O94842 621 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 CDRT1O95170 752 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 CHRM2P08172 466 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 IGHV4-38-2P0DP08 117 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 FSTP19883 344 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 GABRR1P24046 479 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 MAPK3P27361 379 aaPredicted RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 PTGFRP43088 359 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 GABARAPL2P60520 117 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 RPS25P62851 125 aaKnown RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 SRSF2Q01130 221 aaKnown RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 MLLT11Q13015 90 aaPredicted RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 TPBGQ13641 420 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 PDCD1Q15116 288 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 RSU1Q15404 277 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 TBCEQ15813 527 aaPredicted RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 METTL11BQ5VVY1 283 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 ZNF367Q7RTV3 350 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 CEACAM19Q7Z692 300 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 JAGN1Q8N5M9 183 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 LY6G5BQ8NDX9 201 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 WDFY2Q96P53 400 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 YTHDF1Q9BYJ9 559 aaKnown RBP11.34□□□□□ -0.59
TROAP-213ENST00000550709 ACOT13Q9NPJ3 140 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 GLS2Q9UI32 602 aa11.34□□□□□ -0.59
TROAP-213ENST00000550709 TRAV40A0A0B4J280 105 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 TMEM82A0PJX8 343 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 MEX3AA1L020 520 aaKnown RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 K7N7A8 449 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SIRPB1O00241 398 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SH2D1BO14796 132 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 GPX5O75715 221 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 HTR3BO95264 441 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 FSHBP01225 129 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 TK1P04183 234 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 CPEP16870 476 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 RPL31P62899 125 aaKnown RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 PRB3Q04118 309 aaPredicted RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 EMX1Q04741 257 aaPredicted RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 GPR50Q13585 617 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 EDDM3AQ14507 147 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 C11orf91Q3C1V1 193 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 UNQ9370/PRO34162Q6UXP9 181 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 PHC2Q8IXK0 858 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 PDZD9Q8IXQ8 264 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SVOPQ8N4V2 548 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 UPRTQ96BW1 309 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SIRPDQ9H106 197 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 TCF7L1Q9HCS4 588 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 EXOSC4Q9NPD3 245 aaKnown RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 ISYNA1Q9NPH2 558 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 NUP50Q9UKX7 468 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 FOXJ3Q9UPW0 622 aa11.33□□□□□ -0.6
TROAP-213ENST00000550709 SOX21Q9Y651 276 aaPredicted RBP11.33□□□□□ -0.6
TROAP-213ENST00000550709 ZNF737O75373 536 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 OR2H2O95918 312 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 MMP9P14780 707 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 ZNF44P15621 663 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 GP2P55259 537 aaKnown RBP11.32□□□□□ -0.6
TROAP-213ENST00000550709 DLX1P56177 255 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 EDDM3BP56851 147 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 SCGB2A2Q13296 93 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 ZNF146Q15072 292 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 CMTM4Q8IZR5 234 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 BCL6BQ8N143 479 aaPredicted RBP11.32□□□□□ -0.6
TROAP-213ENST00000550709 BPIFB2Q8N4F0 458 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 PXT1Q8NFP0 134 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 THRSPQ92748 146 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 LHX4Q969G2 390 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 MUL1Q969V5 352 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 TBX15Q96SF7 602 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 S100A13Q99584 98 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 MS4A7Q9GZW8 240 aaPredicted RBP11.32□□□□□ -0.6
TROAP-213ENST00000550709 METTL9Q9H1A3 318 aa11.32□□□□□ -0.6
TROAP-213ENST00000550709 PPIL3Q9H2H8 161 aaKnown RBP11.32□□□□□ -0.6
TROAP-213ENST00000550709 TRBV23-1A0A0A0MS06 115 aa11.31□□□□□ -0.6
TROAP-213ENST00000550709 DEGS1O15121 323 aa11.31□□□□□ -0.6
TROAP-213ENST00000550709 PSPNO60542 156 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms