RNA–Protein interactions for RNA: ENST00000550335.5

HCFC2-204, Transcript of host cell factor C2, humanhuman

TSL 5

Gene HCFC2, Length 1,223 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-204ENST00000550335 ZNRD1Q9P1U0 126 aa3.73□□□□□ -1.81
HCFC2-204ENST00000550335 FARSAQ9Y285 508 aaKnown RBP3.73□□□□□ -1.81
HCFC2-204ENST00000550335 WIF1Q9Y5W5 379 aa3.73□□□□□ -1.81
HCFC2-204ENST00000550335 MYH8P13535 1937 aa3.73□□□□□ -1.81
HCFC2-204ENST00000550335 ABCB11O95342 1321 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 PARP14Q460N5 1801 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 TRAV8-6A0A0B4J262 113 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 IGHV1OR15-9A0A0B4J2B8 117 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 J3QT63 122 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 EIF1BO60739 113 aaKnown RBP3.72□□□□□ -1.81
HCFC2-204ENST00000550335 YIF1AO95070 293 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 CTDNEP1O95476 244 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 OR5AL1P0C617 328 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 PCK1P35558 622 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 EIF1P41567 113 aaKnown RBP3.72□□□□□ -1.81
HCFC2-204ENST00000550335 PPIDQ08752 370 aaKnown RBP3.72□□□□□ -1.81
HCFC2-204ENST00000550335 PRSS8Q16651 343 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 RESP18Q5W5W9 173 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 STEAP4Q687X5 459 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 KDM4DQ6B0I6 523 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 NELFCDQ8IXH7 590 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 CA13Q8N1Q1 262 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 IFT81Q8WYA0 676 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 CPB2Q96IY4 423 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF75AQ96N20 296 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 EMC6Q9BV81 110 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 SFXN3Q9BWM7 321 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 NDEL1Q9GZM8 345 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 SLC38A1Q9H2H9 487 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 C1orf198Q9H425 327 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 HEBP1Q9NRV9 189 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ZNF355PQ9NSJ1 428 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ANAPC11Q9NYG5 84 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 MRM2Q9UI43 246 aaKnown RBP3.72□□□□□ -1.81
HCFC2-204ENST00000550335 VAX2Q9UIW0 290 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 SIGLEC7Q9Y286 467 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ORC6Q9Y5N6 252 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ZSWIM8A7E2V4 1837 aa3.72□□□□□ -1.81
HCFC2-204ENST00000550335 ELP1O95163 1332 aa3.71□□□□□ -1.81
HCFC2-204ENST00000550335 TMEM223A0PJW6 202 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ISPDA4D126 451 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 GATCO43716 136 aaKnown RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 LDOC1O95751 146 aaPredicted RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 CST4P01036 141 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 MT-ND4P03905 459 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NQO2P16083 231 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 DSTNP60981 165 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 HHATQ5VTY9 493 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NANOGP8Q6NSW7 305 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 SETD3Q86TU7 594 aaPredicted RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 KRTAP11-1Q8IUC1 163 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 SELENOHQ8IZQ5 122 aaKnown RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 CDRT4Q8N9R6 151 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 OR10G2Q8NGC3 310 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 DOK4Q8TEW6 326 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 TMEM239Q8WW34 195 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NEURL3Q96EH8 262 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ALS2CR12Q96Q35 445 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 VAT1Q99536 393 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 RSG1Q9BU20 258 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 SPZ1Q9BXG8 430 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 SAMD10Q9BYL1 202 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 PRO3102Q9H379 93 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 SPACA1Q9HBV2 294 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ACOT13Q9NPJ3 140 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NECAP2Q9NVZ3 263 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ZNHIT6Q9NWK9 470 aaKnown RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 RMND1Q9NWS8 449 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 AP3M1Q9Y2T2 418 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 PPIL1Q9Y3C6 166 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 GMEB1Q9Y692 573 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 TMEM14AQ9Y6G1 99 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ENPP4Q9Y6X5 453 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 LAMA4Q16363 1823 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 DOCK3Q8IZD9 2030 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NOTCH3Q9UM47 2321 aa3.71□□□□□ -1.82
HCFC2-204ENST00000550335 NUP214P35658 2090 aaPredicted RBP3.71□□□□□ -1.82
HCFC2-204ENST00000550335 ATRXP46100 2492 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 MYH4Q9Y623 1939 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 KIAA0100Q14667 2235 aaKnown RBP3.7□□□□□ -1.82
HCFC2-204ENST00000550335 IGLV3-16A0A075B6K0 115 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 A0A0U1RQV1 116 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 OR5H1A6NKK0 313 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 TRPC5OSA6NMA1 111 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 RSPH10B2B2RC85 870 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 SNAI2O43623 268 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 MED6O75586 246 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 VAMP5O95183 116 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 MMP7P09237 267 aaPredicted RBP3.7□□□□□ -1.82
HCFC2-204ENST00000550335 RSPH10BP0C881 870 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 LOXP28300 417 aaPredicted RBP3.7□□□□□ -1.82
HCFC2-204ENST00000550335 SPAM1P38567 509 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 LRRC63Q05C16 580 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 LOXL1Q08397 574 aaPredicted RBP3.7□□□□□ -1.82
HCFC2-204ENST00000550335 ACTL10Q5JWF8 245 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 ZNF684Q5T5D7 378 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 ERICH5Q6P6B1 374 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 NTM-AS1Q6ZSK4 140 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 SLC16A13Q7RTY0 426 aa3.7□□□□□ -1.82
HCFC2-204ENST00000550335 ENTHD1Q8IYW4 607 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms