RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 GATBO75879 557 aaKnown RBP12.85□□□□□ -0.35
COX6A1-203ENST00000550009 CHRM2P08172 466 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 HTR1AP08908 422 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 UBCP0CG48 685 aaKnown RBP12.85□□□□□ -0.35
COX6A1-203ENST00000550009 ZNF728P0DKX0 622 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 IGHV1-8P0DP01 117 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 DBTP11182 482 aaKnown RBP12.85□□□□□ -0.35
COX6A1-203ENST00000550009 PRKACAP17612 351 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 GABRR1P24046 479 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 GABRA5P31644 462 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 OR3A1P47881 315 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 MTCP1P56278 107 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 TMED1Q13445 227 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 SSX2Q16385 188 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 SMN1Q16637 294 aaKnown RBP12.85□□□□□ -0.35
COX6A1-203ENST00000550009 PDLIM3Q53GG5 364 aaPredicted RBP12.85□□□□□ -0.35
COX6A1-203ENST00000550009 SLC25A30Q5SVS4 291 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 FDX2Q6P4F2 183 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 GDPD3Q7L5L3 318 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 FAM220AQ7Z4H9 259 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 FAM58AQ8N1B3 248 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 OR13C9Q8NGT0 318 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 APH1BQ8WW43 257 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 PDCD1LG2Q9BQ51 273 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 FAM234AQ9H0X4 552 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 HEXA-AS1Q9H8Q6 139 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 ING3Q9NXR8 418 aa12.85□□□□□ -0.35
COX6A1-203ENST00000550009 M0QZ24 198 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 RBP2P50120 134 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 PDZK1IP1Q13113 114 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 ALKBH1Q13686 389 aaKnown RBP12.84□□□□□ -0.35
COX6A1-203ENST00000550009 GRK1Q15835 563 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 FAM189A2Q15884 450 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 TMEM95Q3KNT9 176 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 TMEM244Q5VVB8 128 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 XAF1Q6GPH4 301 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 OR13C3Q8NGS6 347 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 SNX22Q96L94 193 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 ALG8Q9BVK2 526 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 ZNF702PQ9H963 129 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 ZNF581Q9P0T4 197 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 FBLN5Q9UBX5 448 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.84□□□□□ -0.35
COX6A1-203ENST00000550009 GSTK1Q9Y2Q3 226 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 HILPDAQ9Y5L2 63 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 GMPPBQ9Y5P6 360 aa12.84□□□□□ -0.35
COX6A1-203ENST00000550009 TRBV2A0A0J9YWF9 115 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 TIMM23O14925 209 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ISG15P05161 165 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF20P17024 532 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 CD24P25063 80 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 GTF2A1P52655 376 aaPredicted RBP12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ATP1B3P54709 279 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 LGALS4P56470 323 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ACTA2P62736 377 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ACTG2P63267 376 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ACTC1P68032 377 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ACTA1P68133 377 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
COX6A1-203ENST00000550009 CNN3Q15417 329 aaKnown RBP12.83□□□□□ -0.36
COX6A1-203ENST00000550009 PRAMEF5Q5TYX0 476 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 LPCAT4Q643R3 524 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF626Q68DY1 528 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ACBD7Q8N6N7 88 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 KLHDC1Q8N7A1 406 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 OR52I1Q8NGK6 324 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 TRUB1Q8WWH5 349 aaKnown RBP12.83□□□□□ -0.36
COX6A1-203ENST00000550009 PP6455Q8WZ26 134 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 RGP1Q92546 391 aaPredicted RBP12.83□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF714Q96N38 554 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 OPALINQ96PE5 141 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 MMP27Q9H306 513 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 S100A14Q9HCY8 104 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 HMG20AQ9NP66 347 aa12.83□□□□□ -0.36
COX6A1-203ENST00000550009 A6NDX4 124 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 ZFPL1O95159 310 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 CLIC3O95833 236 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 OR2H2O95918 312 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 SERPINA3P01011 423 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 VSIG10L2P0DP72 767 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 GLIPR1P48060 266 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 SCN1BQ07699 218 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 IL18R1Q13478 541 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 GALEQ14376 348 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 ZNF146Q15072 292 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 Q6P435 159 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 CCDC121Q6ZUS5 278 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 UTS2BQ765I0 119 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 DNAAF1Q8NEP3 725 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 OR11H6Q8NGC7 330 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 RHOXF1Q8NHV9 184 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 ORAI1Q96D31 301 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 OR5M11Q96RB7 305 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 SERTAD4Q9NUC0 356 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 ERVK13-1Q9NX77 482 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 HHLA2Q9UM44 414 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 ORC6Q9Y5N6 252 aa12.82□□□□□ -0.36
COX6A1-203ENST00000550009 IGHV2-26A0A0B4J1V2 119 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 KIR2DS4P43632 304 aa12.81□□□□□ -0.36
COX6A1-203ENST00000550009 ZP1P60852 638 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms