RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 GHRLQ9UBU3 117 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 DAPK2Q9UIK4 370 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 METRNQ9UJH8 293 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 MED13LQ71F56 2210 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 SMAD7O15105 426 aaKnown RBP17.67■□□□□ 0.42
VPS29-206ENST00000549578 NDUFA2O43678 99 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 CRTAPO75718 401 aaPredicted RBP17.67■□□□□ 0.42
VPS29-206ENST00000549578 BPNT1O95861 308 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 IL1AP01583 271 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 UBBP0CG47 229 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 VSIG8P0DPA2 414 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 SELLP14151 372 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 ARSBP15848 533 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 PRDX2P32119 198 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 BMXP51813 675 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 GPR176Q14439 515 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 PDCD1Q15116 288 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 SPNS3Q6ZMD2 512 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 OSR2Q8N2R0 312 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 ISOC1Q96CN7 298 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 GAFA1Q96PS6 74 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 MIOXQ9UGB7 285 aa17.67■□□□□ 0.42
VPS29-206ENST00000549578 NKX6-3A6NJ46 265 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 NOL3O60936 208 aaKnown RBP17.66■□□□□ 0.42
VPS29-206ENST00000549578 HAND1O96004 215 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 WNT2P09544 360 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 GTF2F2P13984 249 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 SEC61A1P61619 476 aaKnown RBP17.66■□□□□ 0.42
VPS29-206ENST00000549578 ZNF146Q15072 292 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 SPIN3Q5JUX0 258 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 ATPAF1Q5TC12 328 aaPredicted RBP17.66■□□□□ 0.42
VPS29-206ENST00000549578 METAP1DQ6UB28 335 aaPredicted RBP17.66■□□□□ 0.42
VPS29-206ENST00000549578 ZNF788Q6ZQV5 615 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 OR51T1Q8NGJ9 327 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 FAM3DQ96BQ1 224 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 NEIL1Q96FI4 390 aaPredicted RBP17.66■□□□□ 0.42
VPS29-206ENST00000549578 DCSTAMPQ9H295 470 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 LIN7BQ9HAP6 207 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 PCDHB16Q9NRJ7 776 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 ST3GAL6Q9Y274 331 aa17.66■□□□□ 0.42
VPS29-206ENST00000549578 MAST4O15021 2626 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 CCDC160A6NGH7 325 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 F5H0A9 414 aaPredicted RBP17.65■□□□□ 0.42
VPS29-206ENST00000549578 MPIG6BO95866 241 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 MGMTP16455 207 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 RBM11P57052 281 aaKnown RBP17.65■□□□□ 0.42
VPS29-206ENST00000549578 QRFPP83859 136 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 UNC119Q13432 240 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 SPCS2Q15005 226 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 C2orf76Q3KRA6 126 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 USP43Q70EL4 1123 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 SLC36A1Q7Z2H8 476 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 OR8B3Q8NGG8 313 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 RAB39BQ96DA2 213 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 OR8B2Q96RD0 313 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 RBM38Q9H0Z9 239 aaKnown RBP17.65■□□□□ 0.42
VPS29-206ENST00000549578 CST11Q9H112 138 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 DNTTIP1Q9H147 329 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 KAAG1Q9UBP8 84 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 MAB21L2Q9Y586 359 aa17.65■□□□□ 0.42
VPS29-206ENST00000549578 ABCA2Q9BZC7 2435 aa17.64■□□□□ 0.42
VPS29-206ENST00000549578 TMEM14DPA8MWL7 114 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 H3BMQ9 156 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 FCN3O75636 299 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 CAPZA1P52907 286 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 IL13RA1P78552 427 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 SCN1BQ07699 218 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 IKZF1Q13422 519 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 IDNKQ5T6J7 187 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 NLRC3Q7RTR2 1065 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 FGFRL1Q8N441 504 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 ZNRF1Q8ND25 227 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 SDSLQ96GA7 329 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 BCL7BQ9BQE9 202 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 SELENOIQ9C0D9 397 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 ZNF581Q9P0T4 197 aa17.64■□□□□ 0.41
VPS29-206ENST00000549578 FAM157AC9JC47 383 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 GEMIN2O14893 280 aaKnown RBP17.63■□□□□ 0.41
VPS29-206ENST00000549578 SIGLEC5O15389 551 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 HEXAP06865 529 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 PITPNBP48739 271 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 COL10A1Q03692 680 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 PLA2G7Q13093 441 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 NHLRC3Q5JS37 347 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 KCNG3Q8TAE7 436 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 SLC25A46Q96AG3 418 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 MRPS24Q96EL2 167 aaKnown RBP17.63■□□□□ 0.41
VPS29-206ENST00000549578 COX4I2Q96KJ9 171 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 GLS2Q9UI32 602 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 ZANQ9Y493 2812 aa17.63■□□□□ 0.41
VPS29-206ENST00000549578 TMEM272A0A1B0GTI8 110 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 SIRPB1O00241 398 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 SH2D1BO14796 132 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 OR2H2O95918 312 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 SNRPBP14678 240 aaKnown RBP17.62■□□□□ 0.41
VPS29-206ENST00000549578 ZNF44P15621 663 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 IL13RA2Q14627 380 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 TAF9Q16594 264 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 Q6P435 159 aa17.62■□□□□ 0.41
VPS29-206ENST00000549578 ZNF841Q6ZN19 808 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms