RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 HS3ST1O14792 307 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SIGLEC5O15389 551 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 PPIHO43447 177 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RAMP1O60894 148 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 NDUFA3O95167 84 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 FARS2O95363 451 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 HEXAP06865 529 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TNFRSF1BP20333 461 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SELENOPP49908 381 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RAB25P57735 213 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SLC3A1Q07837 685 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SNTB2Q13425 540 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 EIF2B1Q14232 305 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 FBLN7Q53RD9 439 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 DPPA3Q6W0C5 159 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ETV3LQ6ZN32 361 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SSX7Q7RTT5 188 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 UBQLNLQ8IYU4 475 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 GGACTQ9BVM4 153 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 NMES1Q9C002 83 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TVP23BQ9NYZ1 205 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF319Q9P2F9 582 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 CLEC2DQ9UHP7 191 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 GPR160Q9UJ42 338 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TP53TG5Q9Y2B4 290 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 LOC107986453A0A1B0GWG9 222 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF729A6NN14 1252 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 C9JVG2 144 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 M0R135 149 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 KPNA4O00629 521 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SELENOFO60613 162 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RAB3AP20336 220 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 PRKACGP22612 351 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 STOMP27105 288 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 GDF1P27539 372 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 F2RL1P55085 397 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 GNG3P63215 75 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 PMP22Q01453 160 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 HIKESHIQ53FT3 197 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 MINOS1Q5TGZ0 78 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 FAM69BQ5VUD6 431 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 SPNS3Q6ZMD2 512 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 Q6ZPA2 131 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 STX19Q8N4C7 294 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 C2orf73Q8N5S3 287 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 OR5D13Q8NGL4 314 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 OR10G7Q8NGN6 311 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 FAM46BQ96A09 425 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TSNAXQ99598 290 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RHBDL2Q9NX52 303 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF257Q9Y2Q1 563 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 MINOS1-NBL1R4GNA1 71 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TRIOBPQ9H2D6 2365 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 G3V3Q6 166 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 HIST1H1DP16402 221 aaKnown RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 EDN2P20800 178 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 C21orf33P30042 268 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 APOBEC3AP31941 199 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 COMPP49747 757 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TAS2R46P59540 309 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 OR8G1Q15617 311 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 INPP5JQ15735 1006 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 DDI2Q5TDH0 399 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 OR10R2Q8NGX6 335 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 TCEAL7Q9BRU2 100 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RTL8AQ9BWD3 113 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ULBP2Q9BZM5 246 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 RANBP3Q9H6Z4 567 aaPredicted RBP4.08□□□□□ -1.76
SCAF11-212ENST00000549162 ZFP57Q9NU63 452 aa4.08□□□□□ -1.76
SCAF11-212ENST00000549162 A0A1B0GVI7 797 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 LINC00854A0A1B0GVQ3 168 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 H0YL77 283 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SLC33A1O00400 549 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 PLA2G10O15496 165 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 TOX4O94842 621 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ARG1P05089 322 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 PTGFRP43088 359 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 KIR2DL3P43628 341 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 DNASE1L1P49184 302 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ARPC4P59998 168 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 RAP2BP61225 183 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SRSF1Q07955 248 aaKnown RBP eCLIP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 UBE2V2Q15819 145 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 GLDNQ6ZMI3 551 aaPredicted RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ACP7Q6ZNF0 438 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ZNF429Q86V71 674 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 BPIFB6Q8NFQ5 453 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 OR4K13Q8NH42 304 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ZCCHC14Q8WYQ9 949 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 SEH1LQ96EE3 360 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 CRLF2Q9HC73 371 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 CBLN4Q9NTU7 201 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 ETAA1Q9NY74 926 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 FIS1Q9Y3D6 152 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 MRPL33O75394 65 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 VSIG8P0DPA2 414 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 MYL9P24844 172 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 TAGLN2P37802 199 aaKnown RBP4.07□□□□□ -1.76
SCAF11-212ENST00000549162 MIDNQ504T8 468 aa4.07□□□□□ -1.76
SCAF11-212ENST00000549162 DCXRQ7Z4W1 244 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms