RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 DGUOKQ16854 277 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 SMIM21Q3B7S5 101 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 ZNF788Q6ZQV5 615 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 DCDC5Q6ZRR9 648 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 ZNRF1Q8ND25 227 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 TBC1D15Q8TC07 691 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 FAM46BQ96A09 425 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 C12orf43Q96C57 262 aaKnown RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 CPNE2Q96FN4 548 aaPredicted RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 COX4I2Q96KJ9 171 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 BANF2Q9H503 90 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 ZNF665Q9H7R5 613 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 PATZ1Q9HBE1 687 aaKnown RBP13.56□□□□□ -0.24
LIMS2-217ENST00000545738 PLGRKTQ9HBL7 147 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 RASL12Q9NYN1 266 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 OR14J1Q9UGF5 321 aa13.56□□□□□ -0.24
LIMS2-217ENST00000545738 TMPRSS2O15393 492 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 HTR3BO95264 441 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 ZFP36P26651 326 aaKnown RBP13.55□□□□□ -0.24
LIMS2-217ENST00000545738 KRTAP1-1Q07627 177 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 SPCS2Q15005 226 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 ZNF146Q15072 292 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 RSU1Q15404 277 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 ATPAF1Q5TC12 328 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-217ENST00000545738 SFXN4Q6P4A7 337 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 BIVMQ86UB2 503 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 RTN4RL2Q86UN3 420 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 MUC20Q8N307 709 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-217ENST00000545738 OR51D1Q8NGF3 324 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 FOXRED1Q96CU9 486 aaPredicted RBP13.55□□□□□ -0.24
LIMS2-217ENST00000545738 BARHL1Q9BZE3 327 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 METTL9Q9H1A3 318 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 WNK2Q9Y3S1 2297 aa13.55□□□□□ -0.24
LIMS2-217ENST00000545738 CUBNO60494 3623 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 AIPO00170 330 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 PHF1O43189 567 aaPredicted RBP13.54□□□□□ -0.24
LIMS2-217ENST00000545738 ADAM20O43506 726 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 CYB5AP00167 134 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 KNG1P01042 644 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 RPS2P15880 293 aaKnown RBP13.54□□□□□ -0.24
LIMS2-217ENST00000545738 Q6P435 159 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 TPRA1Q86W33 373 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 Q8IYB0 196 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 SPICQ8N5J4 248 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 OR51T1Q8NGJ9 327 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 ZFAND2BQ8WV99 257 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 SMR3AQ99954 134 aa13.54□□□□□ -0.24
LIMS2-217ENST00000545738 TMEM82A0PJX8 343 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 NOTOA8MTQ0 251 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 TMEM14DPA8MWL7 114 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 KIAA1324LA8MWY0 1029 aaPredicted RBP13.53□□□□□ -0.24
LIMS2-217ENST00000545738 PDCD5O14737 125 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 GEMIN2O14893 280 aaKnown RBP13.53□□□□□ -0.24
LIMS2-217ENST00000545738 LDLRAD4O15165 306 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 PSPNO60542 156 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 ZNF737O75373 536 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 PRDX2P32119 198 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 GABRA2P47869 451 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 SERPINB10P48595 397 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 RAB11BQ15907 218 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 TMEM249Q2WGJ8 235 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 ISOC1Q96CN7 298 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 SDSLQ96GA7 329 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 LIN7BQ9HAP6 207 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 KAAG1Q9UBP8 84 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 STEAP1Q9UHE8 339 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 TEP1Q99973 2627 aaKnown RBP13.53□□□□□ -0.24
LIMS2-217ENST00000545738 A0A0A6YYD4 124 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 H3BMQ9 156 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 SIGLEC5O15389 551 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 HAND1O96004 215 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 PAHP00439 452 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 IGHV4-31P0DP07 118 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 MGMTP16455 207 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 EFNB2P52799 333 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 RBM11P57052 281 aaKnown RBP13.53□□□□□ -0.24
LIMS2-217ENST00000545738 COL10A1Q03692 680 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 IKZF1Q13422 519 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 FOXB2Q5VYV0 432 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 C17orf107Q6ZR85 190 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 OSR2Q8N2R0 312 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 FAM3DQ96BQ1 224 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 NICN1Q9BSH3 213 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 TMUB1Q9BVT8 246 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 SHARPINQ9H0F6 387 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 LPAR2Q9HBW0 351 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 ST3GAL6Q9Y274 331 aa13.53□□□□□ -0.24
LIMS2-217ENST00000545738 DSCAML1Q8TD84 2053 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 TMEM272A0A1B0GTI8 110 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 DVL1O14640 695 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 CRTAPO75718 401 aaPredicted RBP13.52□□□□□ -0.25
LIMS2-217ENST00000545738 OR2H2O95918 312 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 IL1AP01583 271 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 SNRPBP14678 240 aaKnown RBP13.52□□□□□ -0.25
LIMS2-217ENST00000545738 ARSBP15848 533 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 TAF9Q16594 264 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 C2orf76Q3KRA6 126 aa13.52□□□□□ -0.25
LIMS2-217ENST00000545738 SIGIRRQ6IA17 410 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms