RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 GLS2Q9UI32 602 aa15.53■□□□□ 0.08
VIM-209ENST00000544301 NME2P1O60361 137 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 NME2P22392 152 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 FCGR2CP31995 323 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 PMELP40967 661 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 FXYD4P59646 89 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 GGNBP1Q5YKI7 109 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 MDS2Q8NDY4 140 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 BPIFCQ8NFQ6 507 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 MARC2Q969Z3 335 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 POM121Q96HA1 1249 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 IP6K3Q96PC2 410 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 ZNF442Q9H7R0 627 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 NAA60Q9H7X0 242 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 ASF1BQ9NVP2 202 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 TUBD1Q9UJT1 453 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 KLF13Q9Y2Y9 288 aaPredicted RBP15.52■□□□□ 0.08
VIM-209ENST00000544301 MED13Q9UHV7 2174 aa15.52■□□□□ 0.08
VIM-209ENST00000544301 OR7C1O76099 320 aaPredicted RBP15.52■□□□□ 0.07
VIM-209ENST00000544301 IFNA21P01568 189 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 ABCA11PQ4W5N1 156 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 HES3Q5TGS1 186 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 TFAP2EQ6VUC0 442 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 MRPL21Q7Z2W9 205 aaKnown RBP15.52■□□□□ 0.07
VIM-209ENST00000544301 NUFIP2Q7Z417 695 aaKnown RBP15.52■□□□□ 0.07
VIM-209ENST00000544301 FOXRED2Q8IWF2 684 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 BOLLQ8N9W6 283 aaKnown RBP15.52■□□□□ 0.07
VIM-209ENST00000544301 TMED6Q8WW62 240 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 APOBEC3DQ96AK3 386 aaPredicted RBP15.52■□□□□ 0.07
VIM-209ENST00000544301 KCNIP3Q9Y2W7 256 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 R4GN57 208 aa15.52■□□□□ 0.07
VIM-209ENST00000544301 RAB1AP62820 205 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 TMEM187Q14656 261 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 RNPS1Q15287 305 aaKnown RBP15.51■□□□□ 0.07
VIM-209ENST00000544301 SP6Q3SY56 376 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 TMEM200AQ86VY9 491 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 CCDC36Q8IYA8 594 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 HPSE2Q8WWQ2 592 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 RTN4IP1Q8WWV3 396 aaPredicted RBP15.51■□□□□ 0.07
VIM-209ENST00000544301 SLAMF9Q96A28 289 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 FER1L6-AS2Q96M78 137 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 STARD10Q9Y365 291 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 ZNF407Q9C0G0 2248 aa15.51■□□□□ 0.07
VIM-209ENST00000544301 SS18L1O75177 396 aaPredicted RBP15.5■□□□□ 0.07
VIM-209ENST00000544301 APOC3P02656 99 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 HKR1P10072 659 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 BCL3P20749 454 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 ARR3P36575 388 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 GPM6AP51674 278 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 SPEM2Q0P670 501 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 CEACAM21Q3KPI0 293 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 RNF141Q8WVD5 230 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 GALNT14Q96FL9 552 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 POM121L2Q96KW2 1035 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 KNTC1P50748 2209 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 RAB19A4D1S5 217 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 KLRC4-KLRK1H3BQV0 150 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 SIGLEC5O15389 551 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 CST4P01036 141 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 OR5AC1P0C628 307 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 HAAOP46952 286 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 PHLDA2Q53GA4 152 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 PXDC1Q5TGL8 231 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 MCEMP1Q8IX19 187 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 ZDHHC23Q8IYP9 409 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 SAXO1Q8IYX7 474 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 MOB3AQ96BX8 217 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 ZNF629Q9UEG4 869 aaPredicted RBP15.5■□□□□ 0.07
VIM-209ENST00000544301 LIPGQ9Y5X9 500 aa15.5■□□□□ 0.07
VIM-209ENST00000544301 FAM90A10PA6NDY2 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A18PA6NE21 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A16PA6NEW6 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A20PA6NIJ5 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A8PA6NJQ4 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A7PA6NKC0 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A22PA8MWA6 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A12PA8MX19 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A5PA8MXJ8 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A23PA8MXZ1 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 DEDDO75618 318 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 NGFP01138 241 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A15PP0C7V4 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A13PP0C7W8 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A14PP0C7W9 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM90A24PP0C7X0 464 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 FAM157CP0CG43 387 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 UCP3P55916 312 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 TAGLNQ01995 201 aaKnown RBP15.49■□□□□ 0.07
VIM-209ENST00000544301 SLC10A1Q14973 349 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 UQCC3Q6UW78 93 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 LDAHQ9H6V9 325 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 OR2S2Q9NQN1 319 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 SLC2A9Q9NRM0 540 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 BET1O15155 118 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 ACTL6AO96019 429 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 GLP1RP43220 463 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 OR2A2Q6IF42 318 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 ATRAIDQ6UW56 229 aa15.49■□□□□ 0.07
VIM-209ENST00000544301 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.49■□□□□ 0.07
VIM-209ENST00000544301 SPERTQ8NA61 448 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms