RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 UNC119Q13432 240 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 C2orf76Q3KRA6 126 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 TMEM155Q4W5P6 130 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 ELP2Q6IA86 826 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 FGFRL1Q8N441 504 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 Q8NFD4 153 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 FAM3DQ96BQ1 224 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 CYYR1Q96J86 154 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 LIN7BQ9HAP6 207 aa17.36■□□□□ 0.37
OTUB1-211ENST00000543004 DOCK11Q5JSL3 2073 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 CRTAPO75718 401 aaPredicted RBP17.35■□□□□ 0.37
OTUB1-211ENST00000543004 FSTL3O95633 263 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 LMO4P61968 165 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 IDNKQ5T6J7 187 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 FOXB2Q5VYV0 432 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 OSR2Q8N2R0 312 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 MUC20Q8N307 709 aaPredicted RBP17.35■□□□□ 0.37
OTUB1-211ENST00000543004 FAM216BQ8N7L0 139 aa17.35■□□□□ 0.37
OTUB1-211ENST00000543004 TMPRSS2O15393 492 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 ADAM20O43506 726 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 BPNT1O95861 308 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 PAHP00439 452 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 KNG1P01042 644 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 SNRPBP14678 240 aaKnown RBP17.34■□□□□ 0.37
OTUB1-211ENST00000543004 MGMTP16455 207 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 USF1P22415 310 aaPredicted RBP17.34■□□□□ 0.37
OTUB1-211ENST00000543004 CFPP27918 469 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 PRDX2P32119 198 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 DCDC5Q6ZRR9 648 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 USP43Q70EL4 1123 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 SLC25A46Q96AG3 418 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 GAFA1Q96PS6 74 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 ST3GAL6Q9Y274 331 aa17.34■□□□□ 0.37
OTUB1-211ENST00000543004 MPIG6BO95866 241 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 SCN1BQ07699 218 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 ZNF146Q15072 292 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 ZNF788Q6ZQV5 615 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 SPICQ8N5J4 248 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 ZNRF1Q8ND25 227 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 OR51T1Q8NGJ9 327 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 SELENOIQ9C0D9 397 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 PATZ1Q9HBE1 687 aaKnown RBP17.33■□□□□ 0.37
OTUB1-211ENST00000543004 OR5V1Q9UGF6 321 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 PCDHB10Q9UN67 800 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 MAB21L2Q9Y586 359 aa17.33■□□□□ 0.37
OTUB1-211ENST00000543004 CREBBPQ92793 2442 aa17.33■□□□□ 0.36
OTUB1-211ENST00000543004 MAST4O15021 2626 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 TMEM272A0A1B0GTI8 110 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 TMEM14DPA8MWL7 114 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 H7C1Q1 480 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 GEMIN2O14893 280 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 NOL3O60936 208 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 ZNF780AO75290 641 aaPredicted RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 HAND1O96004 215 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 IGHV2-5P01817 119 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 WNT2P09544 360 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 UBBP0CG47 229 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 GTF2F2P13984 249 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 RPS2P15880 293 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 EFNB2P52799 333 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 RBM11P57052 281 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 IKZF1Q13422 519 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 TAF9Q16594 264 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 BCL7BQ9BQE9 202 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 ZNF665Q9H7R5 613 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 RHOFQ9HBH0 211 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 GHRLQ9UBU3 117 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 RSL24D1Q9UHA3 163 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 ACANP16112 2415 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 SMAD7O15105 426 aaKnown RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 LDLRAD4O15165 306 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 COL10A1Q03692 680 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 GPR176Q14439 515 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 ATPAF1Q5TC12 328 aaPredicted RBP17.32■□□□□ 0.36
OTUB1-211ENST00000543004 Q6P435 159 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 OR5H6Q8NGV6 325 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 NICN1Q9BSH3 213 aa17.32■□□□□ 0.36
OTUB1-211ENST00000543004 FAM157AC9JC47 383 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 SIRPB1O00241 398 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 OR2H2O95918 312 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 KCNJ8Q15842 424 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 SPIN3Q5JUX0 258 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 ZNF841Q6ZN19 808 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 BIVMQ86UB2 503 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 LGALS14Q8TCE9 139 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 CST11Q9H112 138 aa17.31■□□□□ 0.36
OTUB1-211ENST00000543004 MALRD1Q5VYJ5 2156 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 A0A0A6YYD4 124 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 F5H0A9 414 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-211ENST00000543004 PHF1O43189 567 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-211ENST00000543004 NDUFA2O43678 99 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 GABRR1P24046 479 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 LOXL1Q08397 574 aaPredicted RBP17.3■□□□□ 0.36
OTUB1-211ENST00000543004 FIP1L1Q6UN15 594 aaKnown RBP17.3■□□□□ 0.36
OTUB1-211ENST00000543004 RTN4RL2Q86UN3 420 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 KCNG3Q8TAE7 436 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 SDSLQ96GA7 329 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 Q96M66 194 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 TMEM59Q9BXS4 323 aa17.3■□□□□ 0.36
OTUB1-211ENST00000543004 LPAR5Q9H1C0 372 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms