RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 A0A1W2PP11 408 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 RFPL4AA6NLU0 287 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 RFPL4AL1F8VTS6 287 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 SH2D1BO14796 132 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 PSG2P11465 335 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 RBM11P57052 281 aaKnown RBP19.33■□□□□ 0.69
HOMER3-205ENST00000542541 IL13RA2Q14627 380 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 ATPAF1Q5TC12 328 aaPredicted RBP19.33■□□□□ 0.69
HOMER3-205ENST00000542541 OR10K2Q6IF99 312 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 DCDC5Q6ZRR9 648 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 LINC00596Q86U02 117 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 ANGPTL6Q8NI99 470 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 GAL3ST1Q99999 423 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 TMEM246Q9BRR3 403 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 OR14J1Q9UGF5 321 aa19.33■□□□□ 0.69
HOMER3-205ENST00000542541 IGHV4-30-2A0A087WSY4 118 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 TMEM272A0A1B0GTI8 110 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 VWC2LB2RUY7 222 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 H3BUI4 141 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 LDLRAD4O15165 306 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 GYPAP02724 150 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 SNRPBP14678 240 aaKnown RBP19.33■□□□□ 0.68
HOMER3-205ENST00000542541 RAB6AP20340 208 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 PRDX2P32119 198 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 SNU13P55769 128 aaKnown RBP19.33■□□□□ 0.68
HOMER3-205ENST00000542541 UNC119Q13432 240 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 STUMQ69YW2 141 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 MZT2AQ6P582 158 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 SPATA2Q9UM82 520 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 PCDHB10Q9UN67 800 aa19.33■□□□□ 0.68
HOMER3-205ENST00000542541 NOTCH2Q04721 2471 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 PAHP00439 452 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 CPT2P23786 658 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 GABRA2P47869 451 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 RPS27AP62979 156 aaKnown RBP19.32■□□□□ 0.68
HOMER3-205ENST00000542541 SLC36A1Q7Z2H8 476 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 LGALS14Q8TCE9 139 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 KCNK15Q9H427 330 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 ZNF665Q9H7R5 613 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 IL36RNQ9UBH0 155 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 MIOXQ9UGB7 285 aa19.32■□□□□ 0.68
HOMER3-205ENST00000542541 IGKV1D-17A0A075B6S4 117 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A10PA6NDY2 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A18PA6NE21 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A16PA6NEW6 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A20PA6NIJ5 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 NKX6-3A6NJ46 265 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A8PA6NJQ4 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A7PA6NKC0 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A22PA8MWA6 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A12PA8MX19 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A5PA8MXJ8 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A23PA8MXZ1 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 HAND1O96004 215 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 CHRM2P08172 466 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A15PP0C7V4 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A13PP0C7W8 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A14PP0C7W9 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 FAM90A24PP0C7X0 464 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 DUSP1P28562 367 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 MPV17LQ2QL34 196 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 PIGYQ3MUY2 71 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 MED30Q96HR3 178 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 Q96M66 194 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 DCUN1D5Q9BTE7 237 aa19.31■□□□□ 0.68
HOMER3-205ENST00000542541 METTL21EPA6NDL7 271 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 TNFRSF13BO14836 293 aaPredicted RBP19.3■□□□□ 0.68
HOMER3-205ENST00000542541 DEGS1O15121 323 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 TAF9Q16594 264 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 CHST4Q8NCG5 386 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 SDSLQ96GA7 329 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 TM2D1Q9BX74 207 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 KAAG1Q9UBP8 84 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 ZNF222Q9UK12 451 aa19.3■□□□□ 0.68
HOMER3-205ENST00000542541 GEMIN2O14893 280 aaKnown RBP19.29■□□□□ 0.68
HOMER3-205ENST00000542541 TMPRSS2O15393 492 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 ADAM20O43506 726 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 SCN1BQ07699 218 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 IKZF1Q13422 519 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 ZNF788Q6ZQV5 615 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 NLRC3Q7RTR2 1065 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 KRTAP1-3Q8IUG1 177 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 ZNF561Q8N587 486 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 CD177Q8N6Q3 437 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 CCL13Q99616 98 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 COMMD3Q9UBI1 195 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 CEACAM18A8MTB9 384 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 OR7C1O76099 320 aaPredicted RBP19.29■□□□□ 0.68
HOMER3-205ENST00000542541 HEXAP06865 529 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 ZNF44P15621 663 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 IL13RA1P78552 427 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 OR5H6Q8NGV6 325 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 Q96MF0 132 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 CMTM3Q96MX0 182 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 LPAR5Q9H1C0 372 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 NARFLQ9H6Q4 476 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 IFT22Q9H7X7 185 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 SPACA1Q9HBV2 294 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 ITGB1BP2Q9UKP3 347 aa19.29■□□□□ 0.68
HOMER3-205ENST00000542541 AKAP9Q99996 3911 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms