RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 J3QT63 122 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 ARPC1BO15143 372 aaKnown RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 NDUFB6O95139 128 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 CD74P04233 296 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 PRKACAP17612 351 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 MPZP25189 248 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 CHATP28329 748 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 DUSP1P28562 367 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 HRH1P35367 487 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 NKX6-1P78426 367 aaPredicted RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 DAZAP2Q15038 168 aaPredicted RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 RNASE10Q5GAN6 216 aaKnown RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 ATAD3CQ5T2N8 411 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 BPIFB2Q8N4F0 458 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 OR4K15Q8NH41 348 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 MAFIPQ8WZ33 124 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 SNAPC3Q92966 411 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 PPP1R14BQ96C90 147 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 SYT3Q9BQG1 590 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 SULT4A1Q9BR01 284 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 GINS4Q9BRT9 223 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 HDHD3Q9BSH5 251 aaPredicted RBP9.37□□□□□ -0.91
SCG3-202ENST00000542355 COQ3Q9NZJ6 369 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 AK3Q9UIJ7 227 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 RELNP78509 3460 aa9.37□□□□□ -0.91
SCG3-202ENST00000542355 A0A087X0M5 115 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 A0A0A6YYJ9 748 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 A0A1B0GX30 115 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 UBE2QL1A1L167 161 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 DPRXA6NFQ7 191 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 PMP2P02689 132 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ZNF250P15622 560 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 PTAFRP25105 342 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 CHRNB4P30926 498 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 CBX5P45973 191 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 MAB21L1Q13394 359 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 RBMS2Q15434 407 aaKnown RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 SCGB2B2Q4G0G5 96 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 IDO2Q6ZQW0 420 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 AKAP14Q86UN6 197 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 BEST4Q8NFU0 473 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 TMEM171Q8WVE6 324 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 DYRK2Q92630 601 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 EMG1Q92979 244 aaKnown RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 SLC6A7Q99884 636 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ZNF701Q9NV72 531 aaPredicted RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 PGPEP1LA6NFU8 196 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ABCD4O14678 606 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 PDCD6O75340 191 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ZNF735P0CB33 412 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 FUT3P21217 361 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ASCL1P50553 236 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 GMFBP60983 142 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 MRPS15P82914 257 aaKnown RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 ADORA2A-AS1P86434 159 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 MEF2DQ14814 521 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 SLC22A25Q6T423 547 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 HOGA1Q86XE5 327 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 FAM58AQ8N1B3 248 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 OR2Z1Q8NG97 314 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 CMSS1Q9BQ75 279 aaKnown RBP9.36□□□□□ -0.91
SCG3-202ENST00000542355 CXXC4Q9H2H0 198 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 ZNF442Q9H7R0 627 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 PLEKHA6Q9Y2H5 1048 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 POLDIP2Q9Y2S7 368 aa9.36□□□□□ -0.91
SCG3-202ENST00000542355 SPTA1P02549 2419 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 NKX2-6A6NCS4 301 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 HMX3A6NHT5 357 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 TMEM210A6NLX4 147 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 DISC1C4P0D8 188 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 PYCARD-AS1I3L0S3 204 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 CA11O75493 328 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 CCNKO75909 580 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 IGHV3-13P01766 116 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 IFNA6P05013 189 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 AMY2BP19961 511 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 RAG2P55895 527 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 KLF3P57682 345 aaPredicted RBP9.35□□□□□ -0.91
SCG3-202ENST00000542355 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 CBX3Q13185 183 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 IKZF1Q13422 519 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 MPPED2Q15777 294 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 NHLRC3Q5JS37 347 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 GIMAP1Q8WWP7 306 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 GTF3AQ92664 365 aaKnown RBP9.35□□□□□ -0.91
SCG3-202ENST00000542355 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
SCG3-202ENST00000542355 PLK3Q9H4B4 646 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 SCP2D1Q9UJQ7 156 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 ANAPC10Q9UM13 185 aa9.35□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A10PA6NDY2 464 aa9.34□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A18PA6NE21 464 aa9.34□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A16PA6NEW6 464 aa9.34□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A20PA6NIJ5 464 aa9.34□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A8PA6NJQ4 464 aa9.34□□□□□ -0.91
SCG3-202ENST00000542355 FAM90A7PA6NKC0 464 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms