RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 MINOS1-NBL1R4GNA1 71 aa11.37□□□□□ -0.59
SNHG1-213ENST00000540725 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 LOC107986453A0A1B0GWG9 222 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 ADARB2-AS1A8MUL3 147 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 PIN1P1O15428 100 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 SULT1C4O75897 302 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 SERPINA3P01011 423 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 GABRR1P24046 479 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 PEX2P28328 305 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 HTR1FP30939 366 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 ZNF91Q05481 1191 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 SLC34A1Q06495 639 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 GRK1Q15835 563 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 ZDHHC13Q8IUH4 622 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 Q8IYB0 196 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 OR4F17Q8NGA8 305 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 OR52N4Q8NGI2 321 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 NDNFQ8TB73 568 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 OR4F4Q96R69 305 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 CHST6Q9GZX3 395 aa11.36□□□□□ -0.59
SNHG1-213ENST00000540725 SEBOXQ9HB31 216 aaPredicted RBP11.36□□□□□ -0.59
SNHG1-213ENST00000540725 TRBV2A0A0J9YWF9 115 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 PSPNO60542 156 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 ALDOBP05062 364 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 UBCP0CG48 685 aaKnown RBP11.35□□□□□ -0.59
SNHG1-213ENST00000540725 FASP25445 335 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 DUSP1P28562 367 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 KIR3DL2P43630 455 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 VDAC2P45880 294 aaPredicted RBP11.35□□□□□ -0.59
SNHG1-213ENST00000540725 NPBWR2P48146 333 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 POU3F4P49335 361 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 RBP2P50120 134 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 ATP1B3P54709 279 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 BLCAPP62952 87 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 TMEM95Q3KNT9 176 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 Q6ZS46 218 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 AMIGO2Q86SJ2 522 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 ENTHD1Q8IYW4 607 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 PRSS35Q8N3Z0 413 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 PP6455Q8WZ26 134 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 C10orf35Q96D05 121 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 CIB1Q99828 191 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 CLEC7AQ9BXN2 247 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 TMEM133Q9H2Q1 129 aa11.35□□□□□ -0.59
SNHG1-213ENST00000540725 RBFOX1Q9NWB1 397 aaKnown RBP11.35□□□□□ -0.59
SNHG1-213ENST00000540725 MGST3O14880 152 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 CYB5AP00167 134 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 BCL3P20749 454 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 AZGP1P25311 298 aaKnown RBP11.34□□□□□ -0.59
SNHG1-213ENST00000540725 ATP6V1E1P36543 226 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
SNHG1-213ENST00000540725 SNU13P55769 128 aaKnown RBP11.34□□□□□ -0.59
SNHG1-213ENST00000540725 ISL1P61371 349 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 TP53I3Q53FA7 332 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 FAM220AQ7Z4H9 259 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 RDH10Q8IZV5 341 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 FAM58AQ8N1B3 248 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 MRAPQ8TCY5 172 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 BCAS4Q8TDM0 211 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 SGCDQ92629 289 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 ADAT3Q96EY9 351 aaPredicted RBP11.34□□□□□ -0.59
SNHG1-213ENST00000540725 GNG8Q9UK08 70 aa11.34□□□□□ -0.59
SNHG1-213ENST00000540725 IGKV1-9A0A0C4DH69 117 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 FAM90A22PA8MWA6 464 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 ENTPD6O75354 484 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 MMP23AO75900 390 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 CALCBP10092 127 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 PRKACAP17612 351 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 HTR1DP28221 377 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 OR3A1P47881 315 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 MTCP1P56278 107 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 P2RX3P56373 397 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF85Q03923 595 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 TMED1Q13445 227 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 IL18R1Q13478 541 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 ZNF146Q15072 292 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 ZBTB49Q6ZSB9 765 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 OR4P4Q8NGL7 312 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 OR8J1Q8NGP2 316 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 RNF166Q96A37 237 aaPredicted RBP11.33□□□□□ -0.6
SNHG1-213ENST00000540725 EME1Q96AY2 570 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 OCSTAMPQ9BR26 566 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 GABARAPL3Q9BY60 117 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 RIBC2Q9H4K1 309 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 NECAP2Q9NVZ3 263 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 AP4S1Q9Y587 144 aa11.33□□□□□ -0.6
SNHG1-213ENST00000540725 H3BUI4 141 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 SIRPB1O00241 398 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 ATF1P18846 271 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 PRKACBP22694 351 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 ERP29P30040 261 aaKnown RBP11.32□□□□□ -0.6
SNHG1-213ENST00000540725 SPIN3Q5JUX0 258 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 PRAMEF5Q5TYX0 476 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 TMEM244Q5VVB8 128 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 UTS2BQ765I0 119 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 OR5AU1Q8NGC0 362 aa11.32□□□□□ -0.6
SNHG1-213ENST00000540725 OR2G2Q8NGZ5 317 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms