RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MLF1P58340 268 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 PDZK1IP1Q13113 114 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 CPEB3Q8NE35 698 aaKnown RBP11.83□□□□□ -0.52
BNIP3-202ENST00000540159 SLAMF9Q96A28 289 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 CLDN23Q96B33 292 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 AQP10Q96PS8 301 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 NRIP2Q9BQI9 281 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 ANAPC10Q9UM13 185 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 OTX1P32242 354 aaPredicted RBP11.83□□□□□ -0.52
BNIP3-202ENST00000540159 TSC22D1Q15714 1073 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 EXT1Q16394 746 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 LINC00696Q6ZRV3 163 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 GGNQ86UU5 652 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF611Q8N823 705 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 ADAMTS17Q8TE56 1095 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 MEMO1Q9Y316 297 aa11.83□□□□□ -0.52
BNIP3-202ENST00000540159 MEX3AA1L020 520 aaKnown RBP11.82□□□□□ -0.52
BNIP3-202ENST00000540159 RNASEK-C17orf49H0YIS7 233 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 IGLV3-1P01715 115 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 PET100P0DJ07 73 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 CRYGSP22914 178 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 GPM6AP51674 278 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 RAC3P60763 192 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 MRPS34P82930 218 aaKnown RBP11.82□□□□□ -0.52
BNIP3-202ENST00000540159 HNF4GQ14541 408 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 IL11RAQ14626 422 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 TIPARPQ7Z3E1 657 aaKnown RBP11.82□□□□□ -0.52
BNIP3-202ENST00000540159 SPAG16Q8N0X2 631 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 OSR2Q8N2R0 312 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 PRR18Q8N4B5 295 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 EIF5A2Q9GZV4 153 aaKnown RBP11.82□□□□□ -0.52
BNIP3-202ENST00000540159 WNT5BQ9H1J7 359 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 RAB19A4D1S5 217 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 VAMP5O95183 116 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 NR2C1P13056 603 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 EDN3P14138 238 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 AADACP22760 399 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 CAV2P51636 162 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 FAM3AP98173 230 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 MIDNQ504T8 468 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 FAM180AQ6UWF9 173 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 FBXW12Q6X9E4 464 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM217Q8N7C4 229 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 TP53RKQ96S44 253 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF700Q9H0M5 742 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 NECAP2Q9NVZ3 263 aa11.82□□□□□ -0.52
BNIP3-202ENST00000540159 LOC102723996A0A087X1L8 192 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 CRYM-AS1A6NIL9 109 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
BNIP3-202ENST00000540159 CHATP28329 748 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 HAAOP46952 286 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 B3GALT5-AS1P59052 145 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 RAB35Q15286 201 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 IZUMO4Q1ZYL8 232 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 FAM76BQ5HYJ3 339 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 ACER2Q5QJU3 275 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 DHRS11Q6UWP2 260 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 OR56B2PQ8NGI1 322 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 OR10Z1Q8NGY1 313 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 NUDT16L1Q9BRJ7 211 aaKnown RBP11.81□□□□□ -0.52
BNIP3-202ENST00000540159 TM2D1Q9BX74 207 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 WFDC1Q9HC57 220 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 KCNIP3Q9Y2W7 256 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 FBXO7Q9Y3I1 522 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 MED12LQ86YW9 2145 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 ARPC4-TTLL3A0A0A6YYG9 625 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF716A6NP11 495 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 ATXN7O15265 892 aaPredicted RBP11.81□□□□□ -0.52
BNIP3-202ENST00000540159 DEDDO75618 318 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 SPP1P10451 314 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 CTSSP25774 331 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 F2RL1P55085 397 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 SPATA46Q5T0L3 261 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 OR2H1Q9GZK4 316 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
BNIP3-202ENST00000540159 WDR54Q9H977 334 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM100Q9NV29 134 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 DOCK11Q5JSL3 2073 aa11.81□□□□□ -0.52
BNIP3-202ENST00000540159 CEACAM18A8MTB9 384 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 EIF3GO75821 320 aaKnown RBP eCLIP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 NGFP01138 241 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 CRYBA1P05813 215 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 IL15RAQ13261 267 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 HFEQ30201 348 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 TMEM268Q5VZI3 342 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 RPS10P5Q9NQ39 176 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 ARHGAP21Q5T5U3 1957 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 ROS1P08922 2347 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 A0A087WZY1 265 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 LOC102725191A0A1B0GVB3 256 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 A0A1W2PR80 420 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 ZNF503-AS2A6NEH8 195 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 LRRC3CA6NJW4 275 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 H3BP45 60 aa11.8□□□□□ -0.52
BNIP3-202ENST00000540159 CNN3Q15417 329 aaKnown RBP11.8□□□□□ -0.52
BNIP3-202ENST00000540159 C17orf78Q8N4C9 275 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms