RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 KCNMB1Q16558 191 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 ZNF343Q6P1L6 599 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 URGCP-MRPS24S4R325 110 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 ETV2O00321 342 aaPredicted RBP17.63■□□□□ 0.41
TMEM260-203ENST00000539559 CELA2AP08217 269 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 EIF2S3P41091 472 aaKnown RBP17.63■□□□□ 0.41
TMEM260-203ENST00000539559 LYSMD4Q5XG99 296 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 GJC3Q8NFK1 279 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 OR1J1Q8NGS3 322 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 NECAP2Q9NVZ3 263 aa17.63■□□□□ 0.41
TMEM260-203ENST00000539559 PPIHO43447 177 aaKnown RBP17.62■□□□□ 0.41
TMEM260-203ENST00000539559 UCP2P55851 309 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 SLC25A53Q5H9E4 307 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 TCTEX1D2Q8WW35 142 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 PP6455Q8WZ26 134 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 TP53RKQ96S44 253 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 MAGT1Q9H0U3 335 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 NELFAQ9H3P2 528 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 TUBA4BQ9H853 241 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 HAGHQ16775 308 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 SLC35G3Q8N808 338 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 NABP1Q96AH0 204 aa17.62■□□□□ 0.41
TMEM260-203ENST00000539559 MSI2Q96DH6 328 aaKnown RBP17.62■□□□□ 0.41
TMEM260-203ENST00000539559 ZNHIT1O43257 154 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 IGHV2-70P01814 119 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 HOXA6P31267 233 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 C9orf152Q5JTZ5 239 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 SOHLH1Q5JUK2 328 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 Q6ZPA2 131 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 LIAT1Q6ZQX7 453 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 C18orf12Q96KH6 178 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 OR6C1Q96RD1 312 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 DECR2Q9NUI1 292 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 ST8SIA3O43173 380 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 NDUFS6O75380 124 aaKnown RBP17.61■□□□□ 0.41
TMEM260-203ENST00000539559 LURAP1LQ8IV03 231 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 SUMF2Q8NBJ7 301 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 METTL9Q9H1A3 318 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 HDGFL3Q9Y3E1 203 aa17.61■□□□□ 0.41
TMEM260-203ENST00000539559 IGKV1-12A0A0C4DH73 117 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 A0A0U1RQV5 110 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 TLX3O43711 291 aaPredicted RBP17.6■□□□□ 0.41
TMEM260-203ENST00000539559 IGKV1D-12P01611 117 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 EWSR1Q01844 656 aaKnown RBP eCLIP17.6■□□□□ 0.41
TMEM260-203ENST00000539559 SHBQ15464 509 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 RHBDD2Q6NTF9 364 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 OR10AD1Q8NGE0 317 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 MR1Q95460 341 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 RASL10BQ96S79 203 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 NKX2-6A6NCS4 301 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 H7C1Q1 480 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 DUSP1P28562 367 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 ECI1P42126 302 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 ZNF133P52736 654 aaPredicted RBP17.6■□□□□ 0.41
TMEM260-203ENST00000539559 KIAA0141Q14154 515 aaPredicted RBP17.6■□□□□ 0.41
TMEM260-203ENST00000539559 FBXL14Q8N1E6 418 aa17.6■□□□□ 0.41
TMEM260-203ENST00000539559 IFITM10A6NMD0 228 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 H0YL77 283 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 K7N7A8 449 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 CTSSP25774 331 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 MSX1P28360 303 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 WDR74Q6RFH5 385 aaPredicted RBP17.59■□□□□ 0.41
TMEM260-203ENST00000539559 ADPRHL1Q8NDY3 354 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 OR2G3Q8NGZ4 309 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 GGACTQ9BVM4 153 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 SEMA5BQ9P283 1151 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 CD63P08962 238 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 S100PP25815 95 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 CHATP28329 748 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 NDUFA6P56556 154 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 LSM6P62312 80 aaKnown RBP17.59■□□□□ 0.41
TMEM260-203ENST00000539559 RHEBQ15382 184 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 ZNF574Q6ZN55 896 aaPredicted RBP17.59■□□□□ 0.41
TMEM260-203ENST00000539559 COMMD1Q8N668 190 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 RNF138Q8WVD3 245 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 PBDC1Q9BVG4 233 aa17.59■□□□□ 0.41
TMEM260-203ENST00000539559 IGSF23A1L1A6 192 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 GDF9O60383 454 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 AADACP22760 399 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 LMO1P25800 156 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 ATP6V0CP27449 155 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 KMT5CQ86Y97 462 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 NTNG2Q96CW9 530 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 GALNT14Q96FL9 552 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 TGIF2Q9GZN2 237 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 ZNF700Q9H0M5 742 aa17.58■□□□□ 0.41
TMEM260-203ENST00000539559 ZFAND5O76080 213 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 RUNX1Q01196 453 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 ARL6IP1Q15041 203 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 PDZD11Q5EBL8 140 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF774Q6NX45 483 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 HEPN1Q6WQI6 88 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 TMEM217Q8N7C4 229 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 TMEM171Q8WVE6 324 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 TCEAL7Q9BRU2 100 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 P4HTMQ9NXG6 502 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 LIPGQ9Y5X9 500 aa17.58■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF724A8MTY0 619 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 DHHO43323 396 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 CST7O76096 145 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms